Query= MSMg01no214_m18.b1 MSMg01no214_m18.b1 CHROMAT_FILE:
MSMg01no214_m18.b1 PHD_FILE: MSMg01no214_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:14 2005
(320 letters)
>mm_chr2_133518481_133519200
Length = 720
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%)
Strand = Plus / Minus
Query: 4 ggaattccttctcatcaccaaccttaatcacttttgttcctagaaaaaaattatcaaatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggaattccttctcatcaccaaccttaatcacttttgttcctagaaaaaaattatcaaatg 459
Query: 64 cagtcgtggtggccaagataaatatgtatgtaagcaccacaaggagtacacttcaccagg 123
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 458 cagtcgtggtggccaagataaatatgtatgaaagcaccacaaggagtccacttcaccagg 399
Query: 124 gagggaaaatattggaacatttgaaaacatctgcaagcatgaaatgagaaattaccagat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gagggaaaatattggaacatttgaaaacatctgcaagcatgaaatgagaaattaccagat 339
Query: 184 caaagaggagtctagttacaaggtcagctaagcaattaatagtagaagagaaagagtctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 caaagaggagtctagttacaaggtcagctaagcaattaatagtagaagagaaagagtctc 279
Query: 244 atagaaactcagaagtattcattattccttcctgtgtggaaacagcagggtccatgttta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 atagaaactcagaagtattcattattccttcctgtgtggaaacagcagggtccatgttta 219
Query: 304 aaaacaaggcaaaga 318
|||||||||||||||
Sbjct: 218 aaaacaaggcaaaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_m18.g1 MSMg01no214_m18.g1 CHROMAT_FILE:
MSMg01no214_m18.g1 PHD_FILE: MSMg01no214_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:14 2005
(292 letters)
>mm_chr2_133375790_133376482
Length = 693
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 1 atttaaactggattcacttctaggtcccatgcgtttacactcatttccaccacaagaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttaaactggattcacttctaggtcccatgcgtttacactcatttccaccacaagaggg 260
Query: 61 cagccatctctaaaaaa-caacagtcgagtgctcttcagagaaattgggccaaacttgag 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagccatctctaaaaaaacaacagtcgagtgctcttcagagaaattgggccaaacttgag 320
Query: 120 gaaagttcctgggaaaggctttttagcagcacctctctgggctacaaaaaagaagccagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagttcctgggaaaggctttttagcagcacctctctgggctacaaaaaagaagccagc 380
Query: 180 aggcaccaccaaggtggagtaactgtccagaggcatccattttacctcggagacttgatt 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aggcaccaccaaggtggagtaactgtccagaggcatccattttacctcagagacttgatt 440
Query: 240 actaaggatatcctaaacggccaaactctctcttctggtgttccagagg 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actaaggatatcctaaacggccaaactctctcttctggtgttccagagg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|