Query= MSMg01no215_l13.b1 MSMg01no215_l13.b1 CHROMAT_FILE:
MSMg01no215_l13.b1 PHD_FILE: MSMg01no215_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:28 2005
(195 letters)
>mm_chr2_174375145_174375739
Length = 595
Score = 377 bits (195), Expect = e-109
Identities = 195/195 (100%)
Strand = Plus / Plus
Query: 1 ttttagttaaaaaacaatcttttaaaaaatatgcctcaccctcagttggttgaatcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttagttaaaaaacaatcttttaaaaaatatgcctcaccctcagttggttgaatcttta 260
Query: 61 ggtatggagagccaactgtatcctccctccctcctttcttccctccgtcctttccttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtatggagagccaactgtatcctccctccctcctttcttccctccgtcctttccttctt 320
Query: 121 tgagaaggaactcttggtgtagcactggctggcctggaactcacaattctcctgcctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagaaggaactcttggtgtagcactggctggcctggaactcacaattctcctgcctctg 380
Query: 181 atccttgaactcctg 195
|||||||||||||||
Sbjct: 381 atccttgaactcctg 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no215_l13.g1 MSMg01no215_l13.g1 CHROMAT_FILE:
MSMg01no215_l13.g1 PHD_FILE: MSMg01no215_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:28 2005
(366 letters)
>mm_chr2_174474725_174475490
Length = 766
Score = 665 bits (344), Expect = 0.0
Identities = 359/366 (98%), Gaps = 4/366 (1%)
Strand = Plus / Minus
Query: 1 gaagaaaatactagaaggatgatccaaaatgcattcagaaatgaaatatgccccaattcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 477 gaagaaaatactagaaggatgatccaaaatgcattcagaaatgaaatatgggtcaattcc 418
Query: 61 ataggccaagatgaataaaatggctttaaaaactaaatgctagacagaagaatgtataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ataggccaagatgaataaaatggctttaaaaactaaatgctagacagaagaatgtataca 358
Query: 121 cagcttttaacatgtaaagaatctatactatctagactctcacaggatcctatatattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cagcttttaacatgtaaagaatctatactatctagactctcacaggatcctatatattat 298
Query: 181 attcatcatttgaagattcaaaacagctaacattaacaagcatcaaagaagggtgagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 attcatcatttgaagattcaaaacagctaacattaacaagcatcaaagaagggtgagcct 238
Query: 241 cattcacataatgtaatacctcacaacaatgtcaggaagatggatagtggacaactagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 cattcacataatgtaatacctcacaacaatgtcaggaagatggatagtggacaactagat 178
Query: 301 agatagatagatagatagatagatagatagatagatagatagatagatagatggatggac 360
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 177 agatagatagatagatagatagatagatagatagatagatagatagata----gatggac 122
Query: 361 gaatgt 366
||||||
Sbjct: 121 gaatgt 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
