Query= MSMg01no217_c09.b1 MSMg01no217_c09.b1 CHROMAT_FILE:
MSMg01no217_c09.b1 PHD_FILE: MSMg01no217_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:30 2005
(368 letters)
>mm_chr2_135489021_135489789
Length = 769
Score = 625 bits (323), Expect = 0.0
Identities = 347/355 (97%), Gaps = 1/355 (0%)
Strand = Plus / Minus
Query: 15 gaattcatttgagatgcacatcttttc-acccactgaacagcaaaggcgaacaatgaatg 73
|||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 569 gaattcatttgaaatgcacatcttttcaacccactgaacagcaaaggctaacaatgaatg 510
Query: 74 gttctagttcacgctggaattgtcacttggatatggataaaaattaaggacctaccaaca 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gttctagttcacgctggaattgtcacttggatatggataaaaattaaggacctaccaaca 450
Query: 134 atattcgtggactatgttccgacctcagtgatacggatctactgaggtgaaggcctctgg 193
||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||
Sbjct: 449 atattcgtggactatgttcagacctcggtgatatggatctactgaggtgaaggcctctga 390
Query: 194 tctaggtgggaaaaagagctgtctaacatgaatgagtgttctgtgttctctctggatcgg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tctaggtgggaaaaagagctgtctaacatgaatgagtgttctgtgttctctctggatcgg 330
Query: 254 ccacttgagttgaatctgagttaaccgttcttcctgcctctatggaaatggctactttag 313
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 329 ccacttgagttgaatctgagttacccgttcttcctgcctctatggaaatggctactttag 270
Query: 314 ttcattcatgccaaataatatcctttaattgtttaggaggaaaagaaggctttac 368
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttcattcatgccaaataatatcctttaattgtttaggaggaaaagaaggctttac 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 769
Length adjustment: 9
Effective length of query: 359
Effective length of database: 760
Effective search space: 272840
Effective search space used: 272840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_c09.g1 MSMg01no217_c09.g1 CHROMAT_FILE:
MSMg01no217_c09.g1 PHD_FILE: MSMg01no217_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:30 2005
(329 letters)
>mm_chr2_135374041_135374769
Length = 729
Score = 327 bits (169), Expect = 6e-94
Identities = 254/321 (79%), Gaps = 59/321 (18%)
Strand = Plus / Plus
Query: 6 aagaacagcttggaaagccctcagtggcccagtgtaaagtaagttctaaaccgcaaggga 65
||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 206 aagaacagcttggaaagtcctcagtggcccagtgtaaagtaagttctaaaaagtaaggga 265
Query: 66 atagaaaacaactatgctttatgctttctgtaacaccacgaagagcttccagtagggtga 125
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atagaaaacaaatatgctttatgctttctgtaacaccacgaagagcttccagtagggtga 325
Query: 126 ccctagtgccacagtaagagccagctcacccttcattggcttccctgcatagcatttttt 185
|||||||||||||||||||||||||||
Sbjct: 326 ccctagtgccacagtaagagccagctc--------------------------------- 352
Query: 186 taggattatctcccaggtaaactactttatcctccatctgcattttcagacattaagtct 245
|||||||||||||||||||||||||| ||| |||
Sbjct: 353 --------------------------ttatcctccatctgcattttcagacactaaatct 386
Query: 246 aagtggaaaaacagaatcttcttgccaaactccattgtgctaaggcaacacaccaaacac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagtggaaaaacagaatcttcttgccaaactccattgtgctaaggcaacacaccaaacac 446
Query: 306 atgttgaaatgaggagcgaga 326
|||||||||||||||| ||||
Sbjct: 447 atgttgaaatgaggagtgaga 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
