Query= MSMg01no218_j10.b1 MSMg01no218_j10.b1 CHROMAT_FILE:
MSMg01no218_j10.b1 PHD_FILE: MSMg01no218_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:39 2005
(319 letters)
>mm_chr2_64352111_64352828
Length = 718
Score = 578 bits (299), Expect = e-169
Identities = 311/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 5 gaattccaacgatctttgacttgcatgatgaaaacagcatgggcgattaggactgactta 64
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaacgaactttgacttacatgatgaaaacagcatgggcgattaggactgactta 264
Query: 65 taaaaacatagaacacaccgcatgttcataagaagatcataatagtgggtcctagcagat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaaaacatagaacacaccgcatgttcataagaagatcataatagtgggtcctagcagat 324
Query: 125 ggatgaaaagctggccacagtcacatacaatcccagtagccttcaccaagacagtagagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggatgaaaagctggccacagtcacatacaatcccagtagccttcaccaagacagtagagt 384
Query: 185 agggctttatggcttcactatgaaaaggctagttgggtgactcatgatatttgctggcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agggctttatggcttcactatgaaaaggctagttgggtgactcatgatatttgctggcta 444
Query: 245 aagttcctacttaaactaattttgatgagtttcaaaatatatatttgctacttcacaatt 304
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 445 aagttcctacttaaactaattttgatgagtttcaaa-tacatatttgctacttcacaatt 503
Query: 305 gaaattttaagagat 319
|||||||||||||||
Sbjct: 504 gaaattttaagagat 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_j10.g1 MSMg01no218_j10.g1 CHROMAT_FILE:
MSMg01no218_j10.g1 PHD_FILE: MSMg01no218_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:39 2005
(189 letters)
>mm_chr2_64498446_64499034
Length = 589
Score = 366 bits (189), Expect = e-106
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 1 ataactgtttaaattgatttgaggagatggaatttttgttctattcagtttctttgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ataactgtttaaattgatttgaggagatggaatttttgttctattcagtttctttgttca 330
Query: 61 ggattgaacatctccttttatatttagatttctgtcatttagaaaccttgcaggagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggattgaacatctccttttatatttagatttctgtcatttagaaaccttgcaggagaaca 270
Query: 121 gtcattcaaggtgactataaaggtagcagagaagctctcagtaaagacacagctagaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtcattcaaggtgactataaaggtagcagagaagctctcagtaaagacacagctagaagg 210
Query: 181 gctggagca 189
|||||||||
Sbjct: 209 gctggagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
