Query= MSMg01no231_h16.b1 MSMg01no231_h16.b1 CHROMAT_FILE:
MSMg01no231_h16.b1 PHD_FILE: MSMg01no231_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:47 2005
(318 letters)
>mm_chr2_32818372_32819096
Length = 725
Score = 555 bits (287), Expect = e-162
Identities = 313/325 (96%), Gaps = 7/325 (2%)
Strand = Plus / Minus
Query: 1 agccctgtttcctaaaagctggggctcactgtcagctcaccactggattgcaccagccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agccctgtttcctaaaagctggggctcactgtcagctcaccactggattgcaccagccaa 466
Query: 61 caatactggtcaggtgcagtggcgggtggctggggcacaagcaagtcctcaccagcaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 465 caatactggtcaggtgcagtggcgggtggctggggcacaagcaagtcctcaccagcagcc 406
Query: 121 ctaacacgattttagggatggaaacaga------taaacccctgaggcactg-ttcattt 173
|||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 405 ctaacacgattttagggatggaaacagataaagttaaacccctgaggcactgtttcattt 346
Query: 174 ctgcacccaggaaagggaacagacaacagacgcctactgtgatctcattccacccctagg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgcacccaggaaagggaacagacaacagacgcctactgtgatctcattccacccctagg 286
Query: 234 tcccaagaaagggatggacacagctgagtagcagactgcagcggatacccagggagtggg 293
||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 285 tcccaagaaaggggtcgacacagctgagtagcacactgcagcggaaacccagggagtggg 226
Query: 294 gccgactcactgttcttctgcttct 318
|||||||||||||||||||||||||
Sbjct: 225 gccgactcactgttcttctgcttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 725
Length adjustment: 9
Effective length of query: 309
Effective length of database: 716
Effective search space: 221244
Effective search space used: 221244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_h16.g1 MSMg01no231_h16.g1 CHROMAT_FILE:
MSMg01no231_h16.g1 PHD_FILE: MSMg01no231_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:47 2005
(287 letters)
>mm_chr2_32728178_32728864
Length = 687
Score = 545 bits (282), Expect = e-160
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 1 agtagtgtggttacttagcagtttcaggtgtttggttcaattccctagtaccacacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagtgtggttacttagcagtttcaggtgtttggttcaattccctagtaccacacacag 260
Query: 61 acaaacccagtataaatggcttatactagaacctctgtctgaggagctgggattttgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaacccagtataaatggcttatactagaacctctgtctgaggagctgggattttgccc 320
Query: 121 aatggtagagcgattgcctagcaaggccctggatttgctctctagcatctggggaggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatggtagagcgattgcctagcaaggccctggatttgctctctagcatctggggaggtaa 380
Query: 181 catcatatatcttttttgaacgcacatttcattacatttgggcaagcatatgctacagtt 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcatatatcttttttgaacgcacatttcattacatttgggcaagcatatgctacagtt 440
Query: 241 ggtacctctcagcccctagaaagatgatccattcctaccctctgtg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtacctctcagcccctagaaagatgatccattcctaccctctgtg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
