Query= MSMg01no232_i07.b1 MSMg01no232_i07.b1 CHROMAT_FILE:
MSMg01no232_i07.b1 PHD_FILE: MSMg01no232_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:01 2005
(685 letters)
>mm_chr2_9111306_9112392
Length = 1087
Score = 1265 bits (654), Expect = 0.0
Identities = 676/684 (98%), Gaps = 2/684 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttaggaaatatcctttgaggatttttttctatttttttt--aatttgttggga 61
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 204 ggaattcttaggaaatatcctttgaggatttttttctattttttttttaatttgttggga 263
Query: 62 gtcctcatctgtccattcattataattttgtttcctttagttctttaaaagtcatatcct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcctcatctgtccattcattataattttgtttcctttagttctttaaaagtcatatcct 323
Query: 122 ctcattctatcatactcatttccttagagtctacttatagcaatgtatttttctcttcta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcattctatcatactcatttccttagagtctacttatagcaatgtatttttctcttcta 383
Query: 182 tagagagaacaatttccaaatacatgacaaatgacttttagtctctagtcttattgtagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagagagaacaatttccaaatacatgacaaatgacttttagtctctagtcttattgtagg 443
Query: 242 taaatcctccaggaatttccaattgtagagactgtagaatcttcattggagtggatgatt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taaatcctccaggaatttccaattgtagagactgtagaatcttcattggagtggatgatt 503
Query: 302 ttgttctagatggaatttaatttctgagtatacccgatgtacttgaagatggtcttaact 361
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 504 ttgttctagatggaatttaatttctgagtataccccatgtacttgaagatggtcttaact 563
Query: 362 atgctcgcgcgaatttgtgttgactttactttcattccaaaattccttaattcctagacc 421
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgctcgtgtgaatttgtgttgactttactttcattccaaaattccttaattcctagacc 623
Query: 422 ttattcctgaggaaaaataattccgagtgttcagtgagttcctaaagtgtttgccaagcc 481
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttattcctgaggaaaaataattctgagtgttcagtgagttcctaaagtgtttgccaagcc 683
Query: 482 atttcaacttgacaggacacaggttctcatcttgacctgcgctttcgtgagtaattcttg 541
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 684 atttcaacttgacaggacacaggctctcatcttgacctgcgctttcgtgagtaattcttg 743
Query: 542 acacttctgctgtggtgctgaagttaaaaccatgacagtcatcttaacatttgaactaca 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acacttctgctgtggtgctgaagttaaaaccatgacagtcatcttaacatttgaactaca 803
Query: 602 aatgaagcacctgttgtatccctctcatctcctttgttttcccatggatgtacagcgctc 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 804 aatgaagcacctgttgtatccctctcatctcctttgttttcccatggatgtacagcactc 863
Query: 662 tctaaagatctgctgaacatctat 685
||||||||||||||||||||||||
Sbjct: 864 tctaaagatctgctgaacatctat 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1087
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1077
Effective search space: 726975
Effective search space used: 726975
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_i07.g1 MSMg01no232_i07.g1 CHROMAT_FILE:
MSMg01no232_i07.g1 PHD_FILE: MSMg01no232_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:01 2005
(340 letters)
>mm_chr2_9274686_9275425
Length = 740
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Minus
Query: 1 ctcttgagtaagtgatgctcagattgtcaaagaaggtaactcagaaaaacacaaataaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctcttgagtaagtgatgctcagattgtcaaagaaggtaactcagaaaaacacaaataaac 477
Query: 61 taatcttttctagttgacttgaacaagttctgtaagtaaaagaaatttaaaatcactccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 taatcttttctagttgacttgaacaagttctgtaagtaaaagaaatttaaaatcactccc 417
Query: 121 agatgattttagatcaaatatgttgcactgtgaataattgttctttttctcccttgtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agatgattttagatcaaatatgttgcactgtgaataattgttctttttctcccttgtttg 357
Query: 181 gcccacctttctcctttaataaatatgaatcatcactgctggagaataattgacactatc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcccacctttctcctttaattaatatgaatcatcactgctggagaataattgacactatc 297
Query: 241 ttctcacaaaactttccttgactacttacttgctttggacacaggaacctctgacttatc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttctcacaaaactttccttgactacttacttgctttggacacaggaacctctgacttatt 237
Query: 301 ttattgcaaggatttcttcatgtcgcttggtctagg 336
||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttattgcaaggatttcttcatgtcgcttggtctagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
