CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACCTGGTCTTACCAGCCACGGGCCAGTTTAGATTCAAGCTGGCCA
AAGAATAAACTCTACTTCATGAGACCGGGAGTTATGACTAATGGCATGAT
GAGGGAGAATGGCCTTGGATGACATTCCTTTCTGTTCACATGTCCTTGTA
GAGCTCTTTCTCATCGCCTAGAGCCGACCGACCGTTGGTGACTTGCTATG
CTGATTTGTGAGTCACTGTGCCTTATCCCTTCTTTTCTGAGACTACTTTC
TTTAGGTAGAGCCAACTGTTATATTGAGAATCTCCTGGAAAGCCCAGGGG
AAAGGAAATTAAGACCTTATAAATACCCAGTATTAACTTGCCTCCTATGT
GAAAAGCCACATTACCACCATTTCATCCACCTCTGCTTAAGCTTCAGGTG
ACTGCAGCCTCATGGAAGATCCCAAGCAGGACCCACCCGGTAGGTTGTCC
ATGAGTTCTGCCTTACTGGGACCATGTGCTATAAAACATATTGATGTTTG
GGGATGGTAAAATTTTACAGTGCTTAGTCAAAGAACGACACAGAAGTAAT
ACAGAGACCATCTTGGAGATAATCTGGGAGTTTCATCTAGGTTTGCTTCA
CTAAAACTCTAACAGGAGTCTCTGAGTCATAACAACATTATGCAACAAAG
GTCATGATATCCTAGACACCCACAGCTTTCCCATCACATGACTTCTTGGA
ACAAAG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTGGATGAAATTACTGGAAAAAC
AATCATCTCAGGAATACTCATTTACTCTTTTGGTGCTCATTGCATGCCTC
CGTTTCAACACAGCATTTTCTTTGAGATCTTTCTACTCCTGGAAAGCGTA
CTAAGTACATGATGTACCAGAAGGCTAAATGACAAGTTACATAGAATGGC
TTGAAGTTAGATGTTGCTGTGTACACTGTCTATGCAACATAATGCAGTGG
CGAAGAAGCCTTGTGTTTTGTGTTGATAAATTCTTTTGAGAACTTGTTTT
GACTTAGTGGTTAGAAGTTAGATTCTACTTTCCAGTTTATATCAGTAAGA
GATTTGCTTCTAAAGACACCTTTTGTTAGTTTCTGAGTATTTATACTTTG
TTAGCTACCTGAAAGAAAGCTCCTTGGAACCTTTTCTTTTCATTGCAAAG
TGATTAGATGTAGCCTCATTCTTGGCATTGAAGATAATTTTGATTTTAGT
TGCAAAATTGAAAAAATATTAAATTGACTAAAACAAATTAACTTTTCTTA
TATCTCANATAAGATTGTATTAAGAGAGTATCGCAGGAGCGCTTTGGGTG
ACTAAGTAAATAGCACATGTACAGACATCTAACTCAGCCAACAGTCACCT
CATTCATTTTGTGAATGTTATCCTAATATTTGCATAGAGCACCAGCTACT
TAAGCATATN

Query= MSMg01no232_m21.b1 MSMg01no232_m21.b1 CHROMAT_FILE:
MSMg01no232_m21.b1 PHD_FILE: MSMg01no232_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:22 2005
         (711 letters)



>mm_chr2_44335053_44336163
          Length = 1111

 Score =  818 bits (423), Expect = 0.0
 Identities = 471/487 (96%)
 Strand = Plus / Minus

                                                                       
Query: 23  cagccacgggccagtttagattcaagctggccaaagaataaactctacttcatgagaccg 82
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |
Sbjct: 490 cagccacgggccagtttagattcaagctggccaaagaataaactctatttcatgagagag 431

                                                                       
Query: 83  ggagttatgactaatggcatgatgagggagaatggccttggatgacattcctttctgttc 142
           |||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 430 ggagttatgagtaatggcatgatgagggagaacagccttggatgacattcctttctgttc 371

                                                                       
Query: 143 acatgtccttgtagagctctttctcatcgcctagagccgaccgaccgttggtgacttgct 202
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 370 acatgtccttgtagagctctttctcatcgcctagagccgacctaccgttggtgacttgct 311

                                                                       
Query: 203 atgctgatttgtgagtcactgtgccttatcccttcttttctgagactactttctttaggt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atgctgatttgtgagtcactgtgccttatcccttcttttctgagactactttctttaggt 251

                                                                       
Query: 263 agagccaactgttatattgagaatctcctggaaagcccaggggaaaggaaattaagacct 322
           ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 250 agagccaactgctatattgagaatctcctgaaaagcccaggggaaaggaaattaagacct 191

                                                                       
Query: 323 tataaatacccagtattaacttgcctcctatgtgaaaagccacattaccaccatttcatc 382
           |||||| ||||||||||||||||||||||||||||||||||||||||| |  ||||||||
Sbjct: 190 tataaacacccagtattaacttgcctcctatgtgaaaagccacattacaagtatttcatc 131

                                                                       
Query: 383 cacctctgcttaagcttcaggtgactgcagcctcatggaagatcccaagcaggacccacc 442
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cacctcttcttaagcttcaggtgactgcagcctcatggaagatcccaagcaggacccacc 71

                                                                       
Query: 443 cggtaggttgtccatgagttctgccttactgggaccatgtgctataaaacatattgatgt 502
            |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 70  gggtaggttgtccatgagttctgccctactgggaccatgtgctataaaacatattgatgt 11

                  
Query: 503 ttgggga 509
           |||||||
Sbjct: 10  ttgggga 4


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 711
Length of database: 1111
Length adjustment: 10
Effective length of query: 701
Effective length of database: 1101
Effective search space:   771801
Effective search space used:   771801
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)

Query= MSMg01no232_m21.g1 MSMg01no232_m21.g1 CHROMAT_FILE:
MSMg01no232_m21.g1 PHD_FILE: MSMg01no232_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:23 2005
         (671 letters)



>mm_chr2_44151632_44152702
          Length = 1071

 Score = 1253 bits (648), Expect = 0.0
 Identities = 665/671 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attggatgaaattactggaaaaacaatcatctcaggaatactcatttactcttttggtgc 60
           |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 attggatgaaattagtggaaaaacaatcatctcaggaatactcagttactcttttggtgc 260

                                                                       
Query: 61  tcattgcatgcctccgtttcaacacagcattttctttgagatctttctactcctggaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcattgcatgcctccgtttcaacacagcattttctttgagatctttctactcctggaaag 320

                                                                       
Query: 121 cgtactaagtacatgatgtaccagaaggctaaatgacaagttacatagaatggcttgaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtactaagtacatgatgtaccagaaggctaaatgacaagttacatagaatggcttgaag 380

                                                                       
Query: 181 ttagatgttgctgtgtacactgtctatgcaacataatgcagtggcgaagaagccttgtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagatgttgctgtgtacactgtctatgcaacataatgcagtggcgaagaagccttgtgt 440

                                                                       
Query: 241 tttgtgttgataaattcttttgagaacttgttttgacttagtggttagaagttagattct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgtgttgataaattcttttgagaacttgttttgacttagtggttagaagttagattct 500

                                                                       
Query: 301 actttccagtttatatcagtaagagatttgcttctaaagacaccttttgttagtttctga 360
           |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 501 actttccagtttatatcagtaagagatttgcttctaaagatacattttgttagtttctga 560

                                                                       
Query: 361 gtatttatactttgttagctacctgaaagaaagctccttggaaccttttcttttcattgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtatttatactttgttagctacctgaaagaaagctccttggaaccttttcttttcattgc 620

                                                                       
Query: 421 aaagtgattagatgtagcctcattcttggcattgaagataattttgattttagttgcaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagtgattagatgtagcctcattcttggcattgaagataattttgattttagttgcaaa 680

                                                                       
Query: 481 attgaaaaaatattaaattgactaaaacaaattaacttttcttatatctcanataagatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 attgaaaaaatattaaattgactaaaacaaattaacttttcttatatctcaaataagatt 740

                                                                       
Query: 541 gtattaagagagtatcgcaggagcgctttgggtgactaagtaaatagcacatgtacagac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtattaagagagtatcgcaggagcgctttgggtgactaagtaaatagcacatgtacagac 800

                                                                       
Query: 601 atctaactcagccaacagtcacctcattcattttgtgaatgttatcctaatatttgcata 660
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atctaattcagccaacagtcacctcattcattttgtgaatgttatcctaatatttgcata 860

                      
Query: 661 gagcaccagct 671
           |||||||||||
Sbjct: 861 gagcaccagct 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)