GGGGGGGGGGGACAGAAAGGGGGAGGGGGAGAGGGGCGGGGGACCACGGG
GGGGGTCAAAAAATGCGCCGGGAAGAGAGTAGTATTTCAAGAGAAAGGGN
GGAATTGGTGTTTTTTCGAAAAAAAGGGTGATGAGAAAGGAAGCAGTATC
TTAAAGAGGATATTTTTTCGGAGAGAGAAAGAGACGGAGATGCGGGGGAG
ATGGGGGGTGGGAGGGAGGATGGATCGTGGAGAGCGAGGGAAATGATGGG
GGGAAAAGGAGGCAAGAAGGGGGACGGATCGGTGCGTGGCGGGTACAAAA
AGGAAGGAAGAAGTAGGAGACAGGGTGTAAAGGGGGGGATGGGAGGAAAG
AAAGGGACAAACAAGGCGTTTAGTATGGAGAGGGGGGGGGGAGGGAAAGG
AGGGGAAGGGGTAATGTTTTAAGTAGAGTAGAGGGGAACAGGGGGGAGGG
GGCGAGGGGGTAGGGCTTAGTTGGGAAGGCGGGGGAGCGGGAGGGGGGGG
GGGAGGGGGGGGAATAGAGAAAAAGGAGAGGTGGGTGGGGGGATGACAAA
AAGGGGGGGGAAGTGATATTGGCGGGTATTAAAATGGGTGGGGGGGAGAA
GGTGGGTTGTCGGGGGGTGAATTAGGAGGAGGGGTGGAGTGGGTGATCAA
AAAGGGGAAGAGGGGAGATATTGGGGGAGAACAAAGGAGGGGGGGGGTGA
GCGTGAGGGAAGGGGGGAAATGGGCGGGGGGGGAGGAGGGAGGAGGGGAA
GGAGGGGGAGATTGTGTTTTAGGCGGAGAAAGCGGGGGACTGTGAGAAAA
GGGGAGAAAAAAGGAAAAAGAAAGGGGAGGAGGAAAGACGGAGGAN

NNACAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGCTATGCAGAGAAACC
CTATCTCANAAAAAAAAAAAAAATTTAACCCCAAAACAAAACAAAAAAAA
AAAAACAAAACCCAAAAACCAAAATCCAAAAAAAAAAAAAAAAAAAAAAA
AAAGAGTTGAACATTGAACATGAGTAGAGGCAACCACAAAGACCTGTAGT
AGGGATTCAAGATTGAGAAATCATCTATTAAGGGAGTTTCAATGATAAAC
ATCATGGTGAAAGGTCAAGCACATTCCTCTCCATAGTTAGGGCTTGTGAA
AAAATTTTGTGTCGCAGTTAAACAATTATAATTGTAAAGGGGGTTTTCAT
ATTGAAATGCAAAAAGAAAAATTTATAATCTCAAATAATTCATGGATCAT
TAAAAAACAGAATGAAGAGAAGTCTTTGAAATGATATGCAAGTTACAAAC
CAGTTGCTACCTATAGCAAAAACAATGCCTGGAAAAAATTACAAATACAT
TCTTTGGTATATGATGTTCAAATTCATGGGTCCAATCAAGTGAGAAGAAC
ATCTATAAAGCAAACAATGATAAAATAATTTAAGATATGAAAGCATAAAA
ATAAAAGAGGATCTAAAGTACAGGAGGTGCAAGTAACTATTGCTATTTTA
GAAAGAATTTAGAGCTAATTAATGT

Query= MSMg01no233_p24.g1 MSMg01no233_p24.g1 CHROMAT_FILE:
MSMg01no233_p24.g1 PHD_FILE: MSMg01no233_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:50 2005
         (571 letters)



>mm_chr2_56025041_56026011
          Length = 971

 Score =  990 bits (512), Expect = 0.0
 Identities = 560/584 (95%), Gaps = 16/584 (2%)
 Strand = Plus / Minus

                                                                       
Query: 2   aaaacaaaacaaaaaaaaa--aaaacaaaacccaaaaaccaaaatccaaaaaaaaaaaaa 59
           |||| |||| |||||||||  |||||||||||||||| ||||||||||||||||||||||
Sbjct: 854 aaaa-aaaa-aaaaaaaaaccaaaacaaaacccaaaagccaaaatccaaaaaaaaaaaaa 797

                                                                       
Query: 60  aaaaaaaaaaa------------aagagttgaacattgaacatgagtagaggcaaccaca 107
           |||||||||||            |||||||||||||||||||||||||||||||||||||
Sbjct: 796 aaaaaaaaaaaaaaaaagagttgaagagttgaacattgaacatgagtagaggcaaccaca 737

                                                                       
Query: 108 aagacctgtagtagggattcaagattgagaaatcatctattaagggagtttcaatgataa 167
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aatacctgtagtagggattcaagattgagaaatcatctattaagggagtttcaatgataa 677

                                                                       
Query: 168 acatcatggtgaaaggtcaagcacattcctctccatagttagggcttgtgaaaaaatttt 227
           |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 676 acatcatggtgaaaggtcaagcacattcctctccatagttagtgcttgtgaagaactttt 617

                                                                       
Query: 228 gtgtcgcagttaaacaattataattgtaaagggggttttcatattgaaatgcaaaaagaa 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 gtgtcgcagttaaacaattataattgtaaagggggttttcatattgaaatgcagaaagaa 557

                                                                       
Query: 288 aaatttataatctcaaataattcatggatcattaaaaaacagaatgaagagaagtctttg 347
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaatttataatctcaaataattcatggatcattaaaaaacagaatgaagagaagtctttg 497

                                                                       
Query: 348 aaatgatatgcaagttacaaaccagttgctacctatagcaaaaacaatgcctggaaaaaa 407
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 496 aaatgatatgcaagttacaaaccagttgctacctatagcagaaacaatgcctggaaaaaa 437

                                                                       
Query: 408 ttacaaatacattctttggtatatgatgttcaaattcatgggtccaatcaagtgagaaga 467
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttacaaatacattctttggtatatgatgttcaaattcatgggtccaatcaagtgagaaga 377

                                                                       
Query: 468 acatctataaagcaaacaatgataaaataatttaagatatgaaagcataaaaataaaaga 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 acatctataaagcaaacaatgataaaataatttaagatatgaaagcataaaaataaaaga 317

                                                       
Query: 528 ggatctaaagtacaggaggtgcaagtaactattgctattttaga 571
           |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 316 ggatctaaagtacaggaggtacaagtaactattgctattttaga 273


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 74
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)