Query= MSMg01no234_p13.b1 MSMg01no234_p13.b1 CHROMAT_FILE:
MSMg01no234_p13.b1 PHD_FILE: MSMg01no234_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:09 2005
(692 letters)
>mm_chr2_95934381_95935472
Length = 1092
Score = 714 bits (369), Expect = 0.0
Identities = 378/381 (99%)
Strand = Plus / Minus
Query: 312 gaaggatgatttatactctttctctccttcacctgcttgccttgtgggactgagtaactg 371
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 gaaggaagatttatactctttctctccttcacctgcttgccttgtgggactgagtaactg 1033
Query: 372 ctagatccttgtacttccattcacagctgctgctgacaatggttgggagttggactgcag 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 ctagatccttgtacttccattcacagctgctgctgacaatggttgggagttggactgcag 973
Query: 432 actgtaagtcatcaacaaattcctttattatatagggactatctataagttctgtgactc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 actgtaagtcatcaacaaattcctttattatatagggactatctataagttctgtgactc 913
Query: 492 tagaaaaccctgactaatactccaaacttctctactcttcttctctgcctgccctattcc 551
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 tagaaaaccctgtctaatactccaaacttctctactcttcttctctgcctgccctattcc 853
Query: 552 cagtcccccaccctcctagttgccacattccagctcccaattgggcagagtttccctgct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 cagtcccccaccctcctagttgccacattccagctcccaattgggcagagtttccctgct 793
Query: 612 tcacaggccagtctggggcagagatttcctactatactaacgacctaacagactgagaaa 671
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 792 tcacaggccagtctggggcagagatttcctactatactaatgacctaacagactgagaaa 733
Query: 672 agttcagataggctaagtgca 692
|||||||||||||||||||||
Sbjct: 732 agttcagataggctaagtgca 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no234_p13.g1 MSMg01no234_p13.g1 CHROMAT_FILE:
MSMg01no234_p13.g1 PHD_FILE: MSMg01no234_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:09 2005
(360 letters)
>mm_chr2_95776245_95777000
Length = 756
Score = 654 bits (338), Expect = 0.0
Identities = 353/360 (98%), Gaps = 4/360 (1%)
Strand = Plus / Plus
Query: 1 tgacaggtgtgtttattatcttgattttgcacagattttatcatatgttatcagatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacaggtgtgtttattatcttgattttgcacagattttatcatatgttatcagatattt 260
Query: 61 gcacattaattttttatcaagtgactatatatatatatattctgaagtatttattgtata 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 gcacattaattttttatcaagtgactatatatatat----tctgaagtatttattgtata 316
Query: 121 atgattttacaataaagttattcttcaaacagcatgtttctttaatttttgtaaacacac 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atgattatacaataaagttattcttcaaacagcatgtttctttaatttttgtaaacacac 376
Query: 181 tccacttctcttgtagaaatgtaatatttcttatagaaacaagattatttcatgagtata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tccacttctcttgtagaaatgtaatatttcttatagaaacaagattatttcatgagtata 436
Query: 241 taacatttttctactgctcaaagtttggatatacacaaacacacacacacacacacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 437 taacatttttctactgctcaaagtttggatatacacaaacacacacacacacacatatat 496
Query: 301 gagggaggaagctaatgacattttatttcttacttctaactggagacacagaatagttta 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gagggaggaaactaatgacattttatttcttacttctaactggagacacagaatagttta 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 756
Length adjustment: 9
Effective length of query: 351
Effective length of database: 747
Effective search space: 262197
Effective search space used: 262197
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
