Query= MSMg01no236_c12.b1 MSMg01no236_c12.b1 CHROMAT_FILE:
MSMg01no236_c12.b1 PHD_FILE: MSMg01no236_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:39 2005
(684 letters)
>mm_chr2_43052315_43053398
Length = 1084
Score = 752 bits (389), Expect = 0.0
Identities = 428/443 (96%), Gaps = 6/443 (1%)
Strand = Plus / Minus
Query: 5 gaattctgtgatttgggtttgagcatgccttctggaaggcttacagtgctgtctaggtta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaattctgtgatttgggtttgagcatgccttctggaaggcttacagtgctgtctaggtta 378
Query: 65 ggggggcctcttgtgtccctgcttaccacagacctcctgggagatagtcaggctaagggg 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggggggccttttgtgtccctgcttaccacagacctcctgggagatagtcaggctaagggg 318
Query: 125 tgtgggagacaggcaggagcgccctatctgccttgggcagaattgcagaatttggtttcc 184
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 317 tgtgggagacaagcaggagcgccctatctgccttgggcagaattgcagaatttgatttcc 258
Query: 185 tttatccatgatttcaattgtttgaaggaattatttgtttgtttgtttgtttatttattt 244
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 257 tttatccatgatttcaattgtttgaaggaa----ttgtttgtttgtttgtttgtttattt 202
Query: 245 atttattcaccttaaatcctgacttcagtgccccctcttctcagttccactcccacagac 304
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 atttattcaccttaaatcctgacttcagtggtccctcttctcagttccactcccacagac 142
Query: 305 cctatctttcccttctacctcccccccatcctcctctgccatatcaactcactgcagtac 364
||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 141 tctacctttcccttctacc-ccccccc-tcctcctctgccatatcaactcactgcagtac 84
Query: 365 taagtacatcttttcccactgagattagacaagccagtacagttagggtaatgagatcac 424
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 taagcacatcttttcccactgagattagacaagccagtacagttagggtaatgagatcac 24
Query: 425 caggtaggcaacagaataaggga 447
|||||||||||||||||||||||
Sbjct: 23 caggtaggcaacagaataaggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_c12.g1 MSMg01no236_c12.g1 CHROMAT_FILE:
MSMg01no236_c12.g1 PHD_FILE: MSMg01no236_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:39 2005
(358 letters)
>mm_chr2_42941412_42942169
Length = 758
Score = 692 bits (358), Expect = 0.0
Identities = 358/358 (100%)
Strand = Plus / Plus
Query: 1 agactacccaaagaacttaacaaaatgtactaataaatcccgtatctttgatagtttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agactacccaaagaacttaacaaaatgtactaataaatcccgtatctttgatagtttggt 260
Query: 61 tatatatctagagaataataacaataaaatataattaatattcagactagatacaatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatatctagagaataataacaataaaatataattaatattcagactagatacaatttt 320
Query: 121 ctaaagtatataatatacatatcacacacacacacacatatatatataaatcatatataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaaagtatataatatacatatcacacacacacacacatatatatataaatcatatataa 380
Query: 181 aaattatcattgcaaagacttatctgcaacaaatatcagtgttaggaatcagaaccccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattatcattgcaaagacttatctgcaacaaatatcagtgttaggaatcagaaccccat 440
Query: 241 tgaagggcacattccactgaaaatggttccatacatcttcagaactggagcttagtctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaagggcacattccactgaaaatggttccatacatcttcagaactggagcttagtctct 500
Query: 301 gtcattgtcactatacaactcctttggagcaattccctaactgaagggtgacatgaaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcattgtcactatacaactcctttggagcaattccctaactgaagggtgacatgaaa 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
