CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTATATTAGCTAAGATTTCTTACTTTTGTGTTGTGTCTGAGCCAAG
AAAAACAGATGATATTGTCCTCAAATTTATCTCACCCGACTCTTCTTTTG
CTTGCCTTTAAAACACTAGCATTTGTTCCTATGCCTAGGGACATTTATAT
CCCTCATGATCAGAGTGCCTTAACTCTTTCACTGATTCTACTCAGTAGAC
AATTTGATAACTGTATTCCTAAATTGCCCTGCAGGTTGCCATATTTACAT
AAAAGGCATTCCTTCTGATGTTCCTTTGCCTTTAAATGAGTAAAAACAAG
GTTCACGGACAATTTGACACCTTAAGTAGGAGCCTCCATTGCTACCAGCC
TCAAACAAAAAGGCTGTCAGCTTAAAAGCAGCTGGATAGGAATATAGTTA
TTTCAATGACTTAAGAACACTGGTCACTTTTCAGAGGACCAAATACCAGC
ACCCATTTGGCTGATAATAGCCATATTTAATTAACTCTAGTCCCATGGCA
TCTGATTCCCTCTTATGATCTTATGAACTCTAAGAGCAACAGGTGTGCAT
ACAAGCACAGAAATTAATGCATATAATAATAAATCACATGCACAGATATA
TACATATATACATACATGTATATATATATGTGTGTGTGTGTGTATATATA
TATATATATAGAGAGAGAGAGAGAGAGAGAGAATCCCCCAC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCATCTGAGGAATATCAAATGGCT
AAGAAGCACCTAAAAAAAATGTTCCCTAACCTTAGTCATCAGGGAAATGA
AAATCAAAACCACCCTGAGATTTCACCTCACACCAGTCAGAATGTCTAAG
ATCAAAAACTCAGGTGACAGTAGATGCTGGCAAGGATGTGGAGAAAGAGT
CACACTCCTCCATTGTTGGTGGGATTGCAAGCTGGTACAACCACTCTGAA
AATCAGTTTGGTGGTTCCTCAGAAAAGTCGACATAGTACTACCGGAGGAT
CCTGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACATGTAA
TAAGGAACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAACCAG
AAGGTAGAAAGAAACCAGATGTCCCTCAACAGAGGAATAGATAAAAAAAA
TATGGTACATTTACACAATGGAATACTACTCAGCTATTAAAACCAATGAA
TTTATGAAATTCTTAGGCAAATGAATGGAACTAGAAAATATCATGCTGAG
TGAGGAAACCCAATCACAAAAGATCACATGATATGCACTCACTGATAAGT
GGACATTAGCCCAGAAGCTCGGGAATACCCAAGATACAATTCACAAACTA
CATGAAACTCAAGAACAAGGAACACCACAATGTGGATACTTTGATCC

Query= MSMg01no237_i11.b1 MSMg01no237_i11.b1 CHROMAT_FILE:
MSMg01no237_i11.b1 PHD_FILE: MSMg01no237_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:23 2005
         (687 letters)



>mm_chr2_95503272_95504358
          Length = 1087

 Score = 1129 bits (584), Expect = 0.0
 Identities = 608/616 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttatattagctaagatttcttacttttgtgttgtgtctgagccaagaaaaacag 64
           |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaattcttatataagataacatttcttacttttgtgttgtgtctgagccaagaaaaacag 557

                                                                       
Query: 65  atgatattgtcctcaaatttatctcacccgactcttcttttgcttgcctttaaaacacta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atgatattgtcctcaaatttatctcacccgactcttcttttgcttgcctttaaaacacta 497

                                                                       
Query: 125 gcatttgttcctatgcctagggacatttatatccctcatgatcagagtgccttaactctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gcatttgttcctatgcctagggacatttatatccctcatgatcagagtgccttaactctt 437

                                                                       
Query: 185 tcactgattctactcagtagacaatttgataactgtattcctaaattgccctgcaggttg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcactgattctactcagtagacaatttgataactgtattcctaaattgccctgcaggttg 377

                                                                       
Query: 245 ccatatttacataaaaggcattccttctgatgttcctttgcctttaaatgagtaaaaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccatatttacataaaaggcattccttctgatgttcctttgcctttaaatgagtaaaaaca 317

                                                                       
Query: 305 aggttcacggacaatttgacaccttaagtaggagcctccattgctaccagcctcaaacaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aggttcacggacaatttgacaccttaagtaggagcctccattgctaccagcctcaaacaa 257

                                                                       
Query: 365 aaaggctgtcagcttaaaagcagctggataggaatatagttatttcaatgacttaagaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaaggctgtcagcttaaaagcagctggataggaatatagttatttcaatgacttaagaac 197

                                                                       
Query: 425 actggtcacttttcagaggaccaaataccagcacccatttggctgataatagccatattt 484
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 196 actggtcacttttcagaggaccaaataccagcacccatttggctgctaatagccatattt 137

                                                                       
Query: 485 aattaactctagtcccatggcatctgattccctcttatgatcttatgaactctaagagca 544
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 136 aattaactctagtcccatggcatctgattccctcttatgaccttatgaactctaagagca 77

                                                                       
Query: 545 acaggtgtgcatacaagcacagaaattaatgcatataataataaatcacatgcacagata 604
           |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 76  acaggtatgcatacaagcacaaaaattaatgcatataatcataaatcacatgcacagata 17

                           
Query: 605 tatacatatatacata 620
           ||||||||||||||||
Sbjct: 16  tatacatatatacata 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space:   729129
Effective search space used:   729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)