CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCTGGCATGGCCTTCCTGGATGGTTTTAAGCCACCATGTGACTGT
AGGGAACCCAACCTGGGTCCTCTGTGAAAGCAGTGAGTGCTTCAGCCCTG
AGCTCATCGTTGTTGTGTTTCCATAATACCCCAGACAACAGTTGGGAGTG
TTTTCACCACAAAGAGACAGCAAGTGTTTATTGTGTGCTGATTACTACCT
TATCATTACACAATGCACACATGCATCAAAACATCACATTTTCTCATAAA
TATGTACAATTATATGTCAATCAAAAGTAACGTAAAACAAGAGTAGGAAA
GGCCTGGTGAGATAGGAGTATAACGCCCCACACTACCTCACAGGGCTCGC
TTGCTCATCAATCATGACTAGCTCCAAGGCCACTGTGCAGGACATGAGGT
GTCAAGAATTGTGGGATTATAAAAAAGGACAGAGAACAAAGAAAGAGGGG
GAATTCCTTTGATTTTTAAAAAAGAGATAAACTGGGTCAAAAAAAGAAAT
ATAGCTTAAATCTGTATTGTAAGCTAATTCCATTTTGAAGTCTTTTGGGA
GACCTTGCATGTTCATTGCTATAAAGCCTTGGCACACTGAGGATATCCCT
CCATACACTGACATTTCATTCTAAGTTAATGGGCAAGGNCATGCCTTGCT
TTTCTGGNAAGGAAGGGCTGAGGATGGGAGGAAGCCCAAAACACATTGCT
TN

GAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAACCCAGAGCTAGAGAGATGGCTAG
GTGGTTGTGTGAGTATGCTTGTGGCTTTGACAAAGGGCATGGGGTTCGCC
CACCTGGCACTTCAGCTCTGGCCAATCTGACACCTTCTGGCTTCCCACAT
TTACACACGCACACACACACATACATAAAATAAATCTTTAAAAATAAAAG
CATTCAGTGTAAGAACGGTGTTCTTGGGTATTCTAAATCCACTTATCTAA
TATCCACTTATCAGTGGCTACATATTGTGCGAGTTCTTTTGTGATTGGGT
TATCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGCCTAGGAATT
TCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCTATTGTGTAAATG
TACCTCATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTT
CCAACTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATG
TGTCCTTCTTACCGGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGT
ATTGCAGGATCCTCCGGTAGTACTATGTCCATTTTTCTGAGGAACCGCCA
GACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAGTGGA
GGAGTGTTCCTCTTTCTCCACATCCTCGNCAGCATCTGCTGTCACCTG

Query= MSMg01no260_j02.b1 MSMg01no260_j02.b1 CHROMAT_FILE:
MSMg01no260_j02.b1 PHD_FILE: MSMg01no260_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:42 2005
         (639 letters)



>mm_chr2_178397591_178398629
          Length = 1039

 Score = 1168 bits (604), Expect = 0.0
 Identities = 625/632 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccctggcatggccttcctggatggttttaagccaccatgtgactgtagggaaccc 64
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctggcatggggttcctggatggttttaagccaccatgtgactgtagggaaccc 264

                                                                       
Query: 65  aacctgggtcctctgtgaaagcagtgagtgcttcagccctgagctcatcgttgttgtgtt 124
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacctgggtcctctgtgaaaacagtgagtgcttcagccctgagctcatcgttgttgtgtt 324

                                                                       
Query: 125 tccataataccccagacaacagttgggagtgttttcaccacaaagagacagcaagtgttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tccataataccccagacaacagttgggagtgttttcaccacaaagagacagcaagtgttt 384

                                                                       
Query: 185 attgtgtgctgattactaccttatcattacacaatgcacacatgcatcaaaacatcacat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attgtgtgctgattactaccttatcattacacaatgcacacatgcatcaaaacatcacat 444

                                                                       
Query: 245 tttctcataaatatgtacaattatatgtcaatcaaaagtaacgtaaaacaagagtaggaa 304
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttcccataaatatgtacaattatatgtcaatcaaaagtaacgtaaaacaagagtaggaa 504

                                                                       
Query: 305 aggcctggtgagataggagtataacgccccacactacctcacagggctcgcttgctcatc 364
           |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 505 aggcctggtgagataggagtataacgccccacactacctcacagggtttgcttgctcatc 564

                                                                       
Query: 365 aatcatgactagctccaaggccactgtgcaggacatgaggtgtcaagaattgtgggatta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aatcatgactagctccaaggccactgtgcaggacatgaggtgtcaagaattgtgggatta 624

                                                                       
Query: 425 taaaaaaggacagagaacaaagaaagagggggaattcctttgatttttaaaaaagagata 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaaaaaggacagagaacaaagaaagagggggaattcctttgatttttaaaaaagagata 684

                                                                       
Query: 485 aactgggtcaaaaaaagaaatatagcttaaatctgtattgtaagctaattccattttgaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aactgggtcaaaaaaagaaatatagcttaaatctgtattgtaagctaattccattttgaa 744

                                                                       
Query: 545 gtcttttgggagaccttgcatgttcattgctataaagccttggcacactgaggatatccc 604
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 745 gtcttttgggagaccttgcatgttcattgctataaagccttggcacgctgaggatatccc 804

                                           
Query: 605 tccatacactgacatttcattctaagttaatg 636
           ||||||||||||||||||||||||||||||||
Sbjct: 805 tccatacactgacatttcattctaagttaatg 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)