Query= MSMg01no261_d07.b1 MSMg01no261_d07.b1 CHROMAT_FILE:
MSMg01no261_d07.b1 PHD_FILE: MSMg01no261_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:32 2005
(531 letters)
>mm_chr2_87466045_87466974
Length = 930
Score = 967 bits (500), Expect = 0.0
Identities = 525/534 (98%), Gaps = 4/534 (0%)
Strand = Plus / Plus
Query: 1 tgtaaaggatgaactaaaaacatgatcatactggggtgatgaaaagtggtctggaattag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaaaggatgaactaaaa-catgatcatactggggtgatgaaaagtggtctggaattag 259
Query: 61 atagaggcaggagatagtatgagcttatggacaatctaaaaagacacatgagggctggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atagaggcaggagatagtatgagcttatggacaatctaaaaagacacatgagggctggaa 319
Query: 121 agatggttcagtggttaagagcactgactgctcttccagaggtcctgagttcaattccca 180
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggtggttcagtggttgagagcactgactgctcttccagaggtcctgagttcaattccca 379
Query: 181 gcaaccacatggtggctcacaaccatctctaatggaatctggtgacctcttctgttgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcaaccacatggtggctcacaaccatctctaatggaatctggtgacctcttctgttgtgc 439
Query: 241 ctaatgacagctacagtgtactcatataaataaaataaataaatcctttt--aaaaaata 298
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 ctaatgacagctacagtgtactcatataaataaaataaataaatcctttttaaaaaaata 499
Query: 299 aaaagatacatgaatactaaaatgtcattttaaaagaatagatattatagggctggagag 358
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaagagacatgaatactaaaatgtcattttaaaagaatagatattatagggctggagag 559
Query: 359 atgttatttgcttatctttctggggaaaatgggaactggctttggatcctatcactcata 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgttatttgcttatctttctggggaaaatgggaactggctttggatcctatcactcata 619
Query: 419 acagcttaaacaatctcttttaactctggctgtaagagatccagtgtcctcttctgacct 478
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 620 acagcttaaacaatctcttttaactctggttgtaagagatccagtgccctcttctgacct 679
Query: 479 cttttggcaataaacacttataaactcatgaagagaaaaa-cactcacagaaaa 531
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 680 cttttggcaataaacacttataaactcatgaagagaaaaaacactcacagaaaa 733
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space: 479320
Effective search space used: 479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no261_d07.g1 MSMg01no261_d07.g1 CHROMAT_FILE:
MSMg01no261_d07.g1 PHD_FILE: MSMg01no261_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:32 2005
(507 letters)
>mm_chr2_87628777_87629683
Length = 907
Score = 919 bits (475), Expect = 0.0
Identities = 499/507 (98%)
Strand = Plus / Minus
Query: 1 tcataaatgaaaatatgtcttcactagaaaccagactaagaagagaccatgacttcaaac 60
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 707 tcatgaatgaaaatatgtcttcactagaaaccagactaagaagagaccatgactccaaac 648
Query: 61 cctaaattttcatgacatccactgcaatcctatttaaaaacagaagatctattgtgtata 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 647 cctaaattttcatgacatccactgcaatcctatttaaaaacagaatatctattgtgtata 588
Query: 121 tttttgaggtttgaagaattattgaatacagcaattcttcacttatcaatcttctgtttt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 587 tttttgaggtttgaagaattattgaatacagcaatgcttcacttatcaatcttctgtttt 528
Query: 181 catcctatgttgtttgtgaaactcttttctgcttagttcagagtgctgtagtctacctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 catcctatgttgtttgtgaaactcttttctgcttagttcagagtgctgtagtctacctca 468
Query: 241 tcattgtgcaatatttacactcataattcataaaaataatgctgtgattcaaaaaagtgg 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 467 tcattgtgcaatatttacactcataactcataaaaataatgctgtgattcaaaaaagtgg 408
Query: 301 gtttcatgatttttgctacaactttaaacagatttaaagcattttctttcattattttat 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtatcatgatttttgctacaactttaaacagatttaaagcattttctttcattattttat 348
Query: 361 agtataaaggaaagccgggtgactgagagtaggttcatttctggcaagttcattacatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 agtataaaggaaagccgggtgactgagagtaggttcatttctggcaagttcattacatgc 288
Query: 421 ttacatgcttaagtcttattattttctggtcttctgtttaaatgaatctgcatttgctgt 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttacaggcttaagtcttattattttctggtcttctgtttaaatgaatctgcatttgctgt 228
Query: 481 tttactgaggtagataatgcagcagtg 507
||||||||||||||||||||| |||||
Sbjct: 227 tttactgaggtagataatgcatcagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
