Query= MSMg01no264_i20.b1 MSMg01no264_i20.b1 CHROMAT_FILE:
MSMg01no264_i20.b1 PHD_FILE: MSMg01no264_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:46 2005
(166 letters)
>mm_chr2_180336301_180336867
Length = 567
Score = 261 bits (135), Expect = 1e-74
Identities = 155/163 (95%), Gaps = 1/163 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagtgaagatggtcagactcagggatgtgaagtggcttttcccatgctcaaagg 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 366 ggaattcagtgaagatggtcagactcagggatgtgaagtggcttttcccatgctgagagg 307
Query: 64 agggacgcctgtgctcccatcaccaccacacagctccgcctgctctgaatgccaagttga 123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 306 agggacgcctgtgctcccatcaccgccacacagctccgcctgctctgaatgccaagttga 247
Query: 124 tgctgaccanntgtanctgtgggacttctgtggngggg-agga 165
||||||||| |||| ||||||||||||||||| |||| ||||
Sbjct: 246 tgctgaccaggtgtagctgtgggacttctgtggggggggagga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 567
Length adjustment: 8
Effective length of query: 158
Effective length of database: 559
Effective search space: 88322
Effective search space used: 88322
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_i20.g1 MSMg01no264_i20.g1 CHROMAT_FILE:
MSMg01no264_i20.g1 PHD_FILE: MSMg01no264_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:46 2005
(104 letters)
>mm_chr2_180177246_180177749
Length = 504
Score = 201 bits (104), Expect = 9e-57
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 gggtaggccatatttcaaaaggcccaggaagcacctgctggacttagctcctcactaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggtaggccatatttcaaaaggcccaggaagcacctgctggacttagctcctcactaggg 260
Query: 61 ctggttagtgtaggaaaaccatggcggggggtggggggtggggg 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggttagtgtaggaaaaccatggcggggggtggggggtggggg 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
