Query= MSMg01no268_l05.b1 MSMg01no268_l05.b1 CHROMAT_FILE:
MSMg01no268_l05.b1 PHD_FILE: MSMg01no268_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:02 2005
(317 letters)
>mm_chr2_27933811_27934529
Length = 719
Score = 561 bits (290), Expect = e-164
Identities = 309/320 (96%), Gaps = 10/320 (3%)
Strand = Plus / Plus
Query: 4 ggaattcaccggggtaggtaccaacatctttggctacagaggtacctcagaggtgccctg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaccggggtaggtaccaacatctttggctacagaggtacctcagaggtgccctg 263
Query: 64 tgtttctctgtctgtttgaaaggcagtaacactcctgaaaacccactggcaatgttccct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtttctctgtctgtttgaaaggcagtaacactcctgaaaacccactggcaatgttccct 323
Query: 124 tggcatgaaccagcgtgctttggtctgtgaattctcccagagggctgtgctttctaatgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggcatgaaccagcgtgctttggtctgtgaattctcccagagggctgtgctttctaatgc 383
Query: 184 agtagcctgaacctggatgtgcaaggttttagatttttttttt--aattggaagcacaga 241
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 384 agtagcctgaacctggatgtgcaaggttttagatttttttttttaaattggaagcacaga 443
Query: 242 agcagacacaataaggtgtcctggtagtgggtaagtgtttt----aaggctatgtgattt 297
||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 444 agcagacacaataaggtgtcctggtagtgagtaagtg----gcaaaaggctatgtgattt 499
Query: 298 tcagtgggaggagaagggac 317
||||||||||||||||||||
Sbjct: 500 tcagtgggaggagaagggac 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 719
Length adjustment: 9
Effective length of query: 308
Effective length of database: 710
Effective search space: 218680
Effective search space used: 218680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_l05.g1 MSMg01no268_l05.g1 CHROMAT_FILE:
MSMg01no268_l05.g1 PHD_FILE: MSMg01no268_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:02 2005
(290 letters)
>mm_chr2_28081209_28081898
Length = 690
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Minus
Query: 1 agccttggaaaccatgttttaaagggagcagttagtgaaggggtggagacaaccccagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 485 agccttggaaaccatgttttaaagggagcagttagtgaaggggtggagagaaccccagtg 426
Query: 61 ggaggctgggaggaagtggcgggatgccagacaccccaggaatgtcccagtccctactcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggaggctgggaggaagtggcgggatgccagacaccccaggaatgtcccagtccctactcc 366
Query: 121 cactgagaaaggattagaaaggatgtctgagctgccagcagacagagctgcaggcaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cactgagaaaggattagaaaggatgtctgagctgccagcagacagagctgcaggcaccag 306
Query: 181 tagatctgtgtaatctaaagcattctggataattccaccctctgttctaaggatcatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tagatctgtgtaatctaaagcattctggataattccaccctctgttctaaggatcatctg 246
Query: 241 ctggttttgatgctgtttagatgagaggaaagagcctttgcgcac 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctggttttgatgctgtttagatgagaggaaagagcctttgcgcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
