Query= MSMg01no271_c08.b1 MSMg01no271_c08.b1 CHROMAT_FILE:
MSMg01no271_c08.b1 PHD_FILE: MSMg01no271_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:58 2005
(312 letters)
>mm_chr2_59666995_59667707
Length = 713
Score = 549 bits (284), Expect = e-161
Identities = 304/316 (96%), Gaps = 10/316 (3%)
Strand = Plus / Plus
Query: 4 ggaattcctgtatagaacctgatctggtttgaggctgagcagagtggacctgcgctgaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ggaattcctgtatagaacctgatctggtttgaggctgagcagagtggacctgcgctgaca 254
Query: 64 ggttcttaat---------cccccccacagcagatctgcactaacaagcacacagcaaat 114
|||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 255 ggttcttaatcgccccccccccccccacagcaggtctgcactaacaagcacacagcaaat 314
Query: 115 caaatctggctgtggagaaagaagaaggtgggaatctgaccccgtcgccaggcctggcag 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 caaatctggctgtggagaaagaagaaggtgggaatctgaccccgtcgccaggcctggcag 374
Query: 175 ggcgggcacgcttgtcagcttgtcagctgctccaacgtccggcttctctgccggctggtg 234
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 375 ggcgggcacgcttgtcagcttgtcagctgctccaacgtccggcttctctgctggctggtg 434
Query: 235 aaacacacgaatcctatttttagcgcagggctgtctgatgtgttactgtca-gacttcag 293
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 435 aaacacacgaatcctatttttagcgcagggctgtctgatgtgttactgtcaagacttcag 494
Query: 294 cagcagctgcagcaga 309
||||||||||||||||
Sbjct: 495 cagcagctgcagcaga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_c08.g1 MSMg01no271_c08.g1 CHROMAT_FILE:
MSMg01no271_c08.g1 PHD_FILE: MSMg01no271_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:58 2005
(293 letters)
>mm_chr2_59826566_59827258
Length = 693
Score = 536 bits (277), Expect = e-157
Identities = 289/293 (98%)
Strand = Plus / Minus
Query: 1 tttttgttgtttgttcattaaagttcaaatttatatctcccttactttgactttcaaata 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 493 tttttgttgtttgttcattaaagttcaaatttatatctcccttactttgagtttcaaata 434
Query: 61 cgtaagcattgaaatggttaagaattcaatgtattaactgataattgaattattccattg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 433 cgtaagcattgaaatggttaagaattcaatgtattaactgataattgagttattccattg 374
Query: 121 atagcatttcagttatgtttgttttgacttatatgctcccttattgctgatctatatggg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 373 atagcatttcagttatgtttgttttgacctatatgctcccttattgctgatctatatggg 314
Query: 181 gtgtagctgaatgaatgccagtttctaggatgagcagtgctgtgcagattacaagccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtgtagctgaatgaatgccagtttctaggatgagcagtgctgtgcagattacaagccaga 254
Query: 241 gactgattccgcagtgatgtaaatcacgtcggcagtgtaaagatgtaggcctg 293
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 253 gactgattccgcagtgatgtaaatcacgtcagcagtgtaaagatgtaggcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
