Query= MSMg01no272_o09.b1 MSMg01no272_o09.b1 CHROMAT_FILE:
MSMg01no272_o09.b1 PHD_FILE: MSMg01no272_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:09 2005
(670 letters)
>mm_chr2_34307723_34308793
Length = 1071
Score = 1253 bits (648), Expect = 0.0
Identities = 663/668 (99%), Gaps = 1/668 (0%)
Strand = Plus / Minus
Query: 4 ggaattctacaacttaacttctgaaaaccaaggataagaggttagacagagcagagccac 63
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ggaattctacaacaaaaattctgaaaaccaaggataagaggttagacagagcagagccac 812
Query: 64 ctgtacctgccattcaccattgctgtcctcacacccccagaatcttccatatcaatctct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ctgtacctgccattcaccattgctgtcctcacacccccagaatcttccatatcaatctct 752
Query: 124 actacatggctcatcatgtgacgttacagcttgatgttcatgggattattcctctctcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 actacatggctcatcatgtgacgttacagcttgatgttcatgggattattcctctctcaa 692
Query: 184 tctgatgcatctcaagtcacaatccaaccctcaggatccccagcaatgagggtaatcttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tctgatgcatctcaagtcacaatccaaccctcaggatccccagcaatgagggtaatcttg 632
Query: 244 atgttttgtaaaaggctggtttctaggctggggtgtggcacagtggttgagcactgaatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 atgttttgtaaaaggctggtttctaggctggggtgtggcacagtggttgagcactgaatg 572
Query: 304 ggggctggaggaggttcttccactcttcaatcactggttccattaactcccagttccttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggggctggaggaggttcttccactcttcaatcactggttccattaactcccagttccttc 512
Query: 364 aaggagttacctacaacttatctacaaagcaagtatgcaatgtttaagaagaaccaatcc 423
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaggagttagctacaacttatctacaaagcaagtatgcaatgtttaagaagaaccaatcc 452
Query: 424 agagtggatgtttagcagccattggctaaaatggacaggtaggaggtcagagagtaaggg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agagtggatgtttagcagccattggctaaaatggacaggtaggaggtcagagagtaaggg 392
Query: 484 tgagtccactctgcacacaa-gaagagcaatgtgaagagcacacagtgaagtctatattg 542
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tgagtccactctgcacacaaggaagagcaatgtgaagagcacacagtgaagtctatattg 332
Query: 543 aaacattccccacacccacccctggtcttcatgttcctttttaccttagagggtaccgag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aaacattccccacacccacccctggtcttcatgttcctttttaccttagagggtaccgag 272
Query: 603 actttcaagagacaataacttaattcaaccacaaaactgataataagacctaaattgctc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 actttcaagagacaataacttaattcaaccacaaaactgataataagacctaaattgctc 212
Query: 663 tatcggta 670
||||||||
Sbjct: 211 tatcggta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1071
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1061
Effective search space: 700260
Effective search space used: 700260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_o09.g1 MSMg01no272_o09.g1 CHROMAT_FILE:
MSMg01no272_o09.g1 PHD_FILE: MSMg01no272_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:09 2005
(672 letters)
>mm_chr2_34194594_34195665
Length = 1072
Score = 1263 bits (653), Expect = 0.0
Identities = 668/673 (99%), Gaps = 1/673 (0%)
Strand = Plus / Plus
Query: 1 aaggaaatctctatggaaacactggctgagggtgcagtacagtggcagagcacctatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aaggaaatctctatggaaacactggctgagggtgcagtacagtggcagagcacctgtgca 260
Query: 61 agcatacactcacttacaaagctacaaaaagaggctgcacatggaaaatatgaaaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcatacactcacttacaaagctacaaaaagaggctgcacatggaaaatatgaaaagaag 320
Query: 121 aaaaaggaaggagcctgcaagaacgtatgtgtgttcatcctaagagtgccaaatggaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaggaaggagcctgcaagaacgtatgtgtgttcatcctaagagtgccaaatggaaag 380
Query: 181 aaaaacggaggaaggcagaaagaattcctgacatatggctgggaacttttaaattgtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaacggaggaaggcagaaagaattcctgacatatggctgggaacttttaaattgtcta 440
Query: 241 aagatacccaaaagtttcattaagctccagagataaatgcaaaatctgcacacagagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagatacccaaaagtttcattaagctccagagataaatgcaaaatctgcacacagagaga 500
Query: 301 agcccacatcacacacagagggtcctgtgaggtgatgtatttaaaatactgaaagggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcccacatcacacacagagggtcctgtgaggtgatgtatttaaaatactgaaagggaaa 560
Query: 361 catgtacattaaaattaatttaaagggggaaagaagttgggctccatggcataaatctgt 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 catgtacattaaaattaatttaaagggggagagaagttgggctccatggcataaatctgt 620
Query: 421 ggttggaactactgggggaggctgtcaatggctcctttaaagataactcacagtggccca 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 ggttggaactactgggggaggctgtcaatggctcctttaaagatacctcacagtggccca 680
Query: 481 cgcctttggaccaagctatctaagaggctgaaacgaagatcatctgagcctcgggagtta 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 cgcctttggaccaagctatctaagaggctgaaacgaagatcatctgagcctcgggagtaa 740
Query: 541 agaccagcctgggcaacatggaaagatattgcaaggaaaaaaaa-tctcaaatcaataac 599
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 agaccagcctgggcaacatggaaagatattgcaaggaaaaaaaaatctcaaatcaataac 800
Query: 600 ataacttcataccttaaagaaacagaacaaactaaatctaaagctagcaagagaaagaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ataacttcataccttaaagaaacagaacaaactaaatctaaagctagcaagagaaagaat 860
Query: 660 ataataaacactg 672
|||||||||||||
Sbjct: 861 ataataaacactg 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
