Query= MSMg01no272_p10.b1 MSMg01no272_p10.b1 CHROMAT_FILE:
MSMg01no272_p10.b1 PHD_FILE: MSMg01no272_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:14 2005
(545 letters)
>mm_chr2_44876911_44877855
Length = 945
Score = 946 bits (489), Expect = 0.0
Identities = 534/553 (96%), Gaps = 10/553 (1%)
Strand = Plus / Minus
Query: 1 aattccatctaatcattctttttttgttaagtgtgaatgtgatttcacagttttacctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 aattccatctaatcattctttttttgttaagtgtgaatgtgatttcacagttttacctgg 843
Query: 61 tcaggtagctttcttactatttaacagttaagtactcgataatgattcgtactgtttgat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 842 tcaggtagctttcttactatttaacagttaagtactcgataatgattcttactgtttgat 783
Query: 121 ggtcatcttaagggaagttaaaaaacaaaacaaaacaaaacaaaacccaaacaaacaaa- 179
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 782 ggtcatcttaagggaagttaaaaaacaaaacaaaacaaaacaaaa--caaacaaaaaaaa 725
Query: 180 -----caaacaaacaaacaaacaaaaagaccggtccagtgccaactgtaatagaagtaaa 234
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aaacccaaccaaacaaacaaacaaaaagaccggtccagtgccaactgtaatagaagtaaa 665
Query: 235 acagatcagtttcaatctgattcttccgatgtcactgcacaaatggaaatgcctgagcct 294
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 664 acagatcagtttcaatctgaaacttccgatgtcactgcacaaatggaaatgcctgagcct 605
Query: 295 gatattcccctggagtggaagacagggcatgctaacgaaaatccaagggcctgcctcgga 354
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 604 gaaattcccctggagtggaagacagggcatgctaacgaaaatccaagggcctgcctctga 545
Query: 355 agcttaagtggcctgtgagaagttttttaaaagtcccctctaattcagactttgtgtctc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 agcttaagtggcctgtgagaagttttttaaaagtcccctctaattcagactttgtgtctc 485
Query: 415 cttcacctctattctatgacctaataagaattaccgttatgtagcccaccttggttttgc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cttcacctctattctatgacctaataagaattaccgttatgtagcccaccttggttttgc 425
Query: 475 gttgacaatataaataactactgtttttgtttgtgtgtgtgt-t-tgtttgtttgtttgt 532
|||||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||
Sbjct: 424 gttgacaatataaataactactgtttgtgtgtgtgtgtgtgtgtgtgtttgtttgtttgt 365
Query: 533 ttgattgattaat 545
|||||||||||||
Sbjct: 364 ttgattgattaat 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_p10.g1 MSMg01no272_p10.g1 CHROMAT_FILE:
MSMg01no272_p10.g1 PHD_FILE: MSMg01no272_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:14 2005
(291 letters)
>mm_chr2_44691060_44691750
Length = 691
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 taagctaatgtaagcctcagggtctaagacaatatctgtaaattgacatgaatttaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagctaatgtaagcctcagggtctaagacaatatctgtaaattgacatgaatttaacaa 260
Query: 61 cacctgaagattttcattgtttgacttattatcattccactttaattctggaagcagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacctgaagattttcattgtttgacttattatcattccactttaattctggaagcagaac 320
Query: 121 taggataagaagccaattcccttaccatcaacctccagatcccattccacatttaataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggataagaagccaattcccttaccatcaacctccagatcccattccacatttaataat 380
Query: 181 tagacttttatttaatggggaagtaaaaaggcatttttaaatcctttctgctattattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagacttttatttaatggggaagtaaaaaggcatttttaaatcctttctgctattattca 440
Query: 241 ttttataaatgtttgacaagatgaataatatacatgctttctcaagatg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttataaatgtttgacaagatgaataatatacatgctttctcaagatg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
