XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TTCCAGTCTTCTCCTCCTCTTCATCCTCACAGTACTAATATGCTGAAGGT
TCCTGTTGCAGCTGATGCTACAGTTATCCATCCTATGGCAAGAAATCCCT
CTCTCTTTCAGTCACACATGGTGGGATGTGTTAGGATTTATATGAAATAA
CAATAGAAAACCAGTCTGAGGACTCAGACCTGTAATCTCAGCTAATCAAG
AATTTGAGGTAGAAAGGTCCCAAATTCAAAGCCTGTTTGTCTTACAGTGA
CTGTATATCAAACCTTGGCAACTTAGTGAGACCCTGACACACAAGAAGTA
AAAATAAAAAAAAAATCCAAAAGTAAGAAAGTCAATCTTTTATGCTCTTA
AGTGTCTGGTATTTTAATTGCTAATTTTCCTTTTTCTTATACTTTGCCAC
AGATACCATTTCCTTTTAGAGATATAGACATGGTCCCATAGGAGATAGAT
CACAGAGAGAATAAATAAGATGCTAATAGAGCTCCTCTCAAAATCTCTAC
CCACAATGCCCCATGGTATCACTAAAGAATCTTGCTGACAGTACAGCTGT
TTGATCAAAGTGCTACCTTTGTTTTGATAAACTATTCAAATTGTCAAATA
ATCATTTTGTAAGTCCAAGTTCTAAGACCAATTACATGAGTCTATCCTAC
CCAGTTGCCTTATGTTCCACAGGGTTTACCAGGACATTCAGGG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGAATGGGT
GTTGGATCTTGTTTAATGCCTTTTCTGCATCTAACGAGATGATCATGTGG
TTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTCG
TATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGAT
GGATGATTTCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTA
AGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTAT
CTTTGTTGGATCTTTCTGTGCCTTACGCATCAGAGTAATAGTGGCTTCAT
AAAATGAGTTGGGTAGAGTACCTTCTACTTCTATCTTGTGAAATAGTTTG
TGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACT
AAACCCATCTGGTCCTAGGCTTTTTTTGGCTGGGAGACTATTAATAACTG
CTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAAGTTGATCC
TGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTC
CAGGTTTTCCAGTTTTGTTGAGTATAAGCTTTTGTAGAAGGATCTAATGG
TGTTTTGGATTTCTTCAGGATCTGTTGTTATGTCTCCCTTTTC

Query= MSMg01no274_b23.b1 MSMg01no274_b23.b1 CHROMAT_FILE:
MSMg01no274_b23.b1 PHD_FILE: MSMg01no274_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:37 2005
         (704 letters)



>mm_chr2_107213203_107214306
          Length = 1104

 Score = 1122 bits (580), Expect = 0.0
 Identities = 585/588 (99%), Gaps = 3/588 (0%)
 Strand = Plus / Minus

                                                                        
Query: 120  cagtcacacatggtgggatgtgttaggatttatatgaaataacaatagaaaaccagtctg 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 cagtcacacatggtgggatgtgttaggatttatatgaaataacaatagaaaaccagtctg 1045

                                                                        
Query: 180  aggactcagacctgtaatctcagctaatcaagaatttgaggtagaaaggtcccaaattca 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 aggactcagacctgtaatctcagctaatcaagaatttgaggtagaaaggtcccaaattca 985

                                                                        
Query: 240  aagcctgtttgtcttacagtgactgtatatcaaaccttggcaacttagtgagaccctgac 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984  aagcctgtttgtcttacagtgactgtatatcaaaccttggcaacttagtgagaccctgac 925

                                                                        
Query: 300  acacaagaagtaaaaat---aaaaaaaaaatccaaaagtaagaaagtcaatcttttatgc 356
            |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 924  acacaagaagtaaaaataaaaaaaaaaaaatccaaaagtaagaaagtcaatcttttatgc 865

                                                                        
Query: 357  tcttaagtgtctggtattttaattgctaattttcctttttcttatactttgccacagata 416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864  tcttaagtgtctggtattttaattgctaattttcctttttcttatactttgccacagata 805

                                                                        
Query: 417  ccatttccttttagagatatagacatggtcccataggagatagatcacagagagaataaa 476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804  ccatttccttttagagatatagacatggtcccataggagatagatcacagagagaataaa 745

                                                                        
Query: 477  taagatgctaatagagctcctctcaaaatctctacccacaatgccccatggtatcactaa 536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744  taagatgctaatagagctcctctcaaaatctctacccacaatgccccatggtatcactaa 685

                                                                        
Query: 537  agaatcttgctgacagtacagctgtttgatcaaagtgctacctttgttttgataaactat 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684  agaatcttgctgacagtacagctgtttgatcaaagtgctacctttgttttgataaactat 625

                                                                        
Query: 597  tcaaattgtcaaataatcattttgtaagtccaagttctaagaccaattacatgagtctat 656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624  tcaaattgtcaaataatcattttgtaagtccaagttctaagaccaattacatgagtctat 565

                                                            
Query: 657  cctacccagttgccttatgttccacagggtttaccaggacattcaggg 704
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564  cctacccagttgccttatgttccacagggtttaccaggacattcaggg 517


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space:   759236
Effective search space used:   759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)