CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTATCTTTCANAAGAGAGTGGTTTTGTTACTTCCAAAACACCCCTC
CTCTGATACACACATTCAACGCCTTTTAAGTATATAGAGAACGTTGTGAA
AATTACTATCACCACTTGACCCCAACTTTAACTATGGGTCTCTCTTGGGT
GAAAAAAAATCTTGAAAATCCCATAATATTCTTCTAAAACCTCATCAATA
CTATTTCTACTTTTCATTTTTTTTAGCTAATATAATTTATATTACTTGCC
ATGACTCTTTTGTCATATATGTTTGATTAAACAAACAAATAAACAGAATT
AAGTCATGATTATATTGACACTAACATTGAAGATGCTGACAGAGGGATAT
AATGATTGAGAACAGGAAGCAATACAAAAGTTATCTGTTATTTTAACAAA
GACTGTCTACCTCAAACAGACAGACTTCCATAATTTTACCATGCTACAAA
TAATGGCCTTTAGGGTTTGTCTTAGTTAGGGTTTCTATTGATGCGATAAA
AACACCATGACAAAAAGCAAGTTGAGGAGGAAAGGGTTAGTTCAGCTTGT
ACTTCCAGATGATAGTCCACTACTAAAGGAAGTCAGGACAGAAACTTAAG
CAGGGCTTCAACCTGGAGATAGTAGCTGATGCAGAGGCCATGTGCTGCTT
ACTGGCCTGG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTGAAAATTCAGAAACTGTTTGT
ACCAAGGACCCTTAGAATGAACCCATATTCATAAATCAAGACGAATCAGT
GCTGACCGAAGTTTGTTGAAAAAGGCCATCTGAGCTCAGATCTCTTTTGT
ATACCCATGCTGTAAAGCCAGAGTCTTTGTTTACAGCAATGGAAGAGCAG
TCTGGATCAGATGGAATTTCAGTTTGTAGATGGTTAGGGACCAGTCGTGA
TTGCTGAACCAAGGGCTGAGTCCAGTGAAACCTGACATCTGATGACCAGA
ACTCACAGTAGTTTTTTCCGCCACCTCCCCCATATCAGGTTCCCAATTAA
ACATATAGCATGTGATCCAGGGACACTAAGGTTACCCTTCTGTAGAGACA
CATTAAGTATGACACCAGGAAAAACCAAAAGAACAAAAGAGGCCATCCCC
TTGCCTCCTGGAGGTGCTGAGTTAACCTAAAGGAGATTACCTTGGTCAAA
CTGACTCAGTCTTTATTAGGCAGAATCAGCCAAGAGATATTCTCCTGCTG
GGCTGAGAAAAAGGAATTAGGCATGCTATGAACTACAAATAGAGGCGACA
CACAAGAGACAATGAAGACCCCAAAGCATTGAGTGATAGGGAGTGAAGCA
TGAAGGGGTCGGG

Query= MSMg01no277_m10.b1 MSMg01no277_m10.b1 CHROMAT_FILE:
MSMg01no277_m10.b1 PHD_FILE: MSMg01no277_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:58 2005
         (330 letters)



>mm_chr2_142522997_142523726
          Length = 730

 Score =  638 bits (330), Expect = 0.0
 Identities = 330/330 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgaagatgctgacagagggatataatgattgagaacaggaagcaatacaaaagttatctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgaagatgctgacagagggatataatgattgagaacaggaagcaatacaaaagttatctg 281

                                                                       
Query: 61  ttattttaacaaagactgtctacctcaaacagacagacttccataattttaccatgctac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttattttaacaaagactgtctacctcaaacagacagacttccataattttaccatgctac 221

                                                                       
Query: 121 aaataatggcctttagggtttgtcttagttagggtttctattgatgcgataaaaacacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aaataatggcctttagggtttgtcttagttagggtttctattgatgcgataaaaacacca 161

                                                                       
Query: 181 tgacaaaaagcaagttgaggaggaaagggttagttcagcttgtacttccagatgatagtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tgacaaaaagcaagttgaggaggaaagggttagttcagcttgtacttccagatgatagtc 101

                                                                       
Query: 241 cactactaaaggaagtcaggacagaaacttaagcagggcttcaacctggagatagtagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cactactaaaggaagtcaggacagaaacttaagcagggcttcaacctggagatagtagct 41

                                         
Query: 301 gatgcagaggccatgtgctgcttactggcc 330
           ||||||||||||||||||||||||||||||
Sbjct: 40  gatgcagaggccatgtgctgcttactggcc 11


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space:   231441
Effective search space used:   231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no277_m10.g1 MSMg01no277_m10.g1 CHROMAT_FILE:
MSMg01no277_m10.g1 PHD_FILE: MSMg01no277_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:58 2005
         (283 letters)



>mm_chr2_142374620_142375302
          Length = 683

 Score =  462 bits (239), Expect = e-135
 Identities = 269/279 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgaaaattcagaaactgtttgtaccaaggacccttagaatgaacccatattcataaat 60
           ||||||||||||||||||||||||||||||| |||| ||||||||   ||||||||||||
Sbjct: 201 cctgaaaattcagaaactgtttgtaccaaggtccctcagaatgaagtgatattcataaat 260

                                                                       
Query: 61  caagacgaatcagtgctgaccgaagtttgttgaaaaaggccatctgagctcagatctctt 120
           |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 caaggcgaatcagtgctgaccgaagtttgttggaaaaggccatctgagctcagatctctt 320

                                                                       
Query: 121 ttgtatacccatgctgtaaagccagagtctttgtttacagcaatggaagagcagtctgga 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtatacccatgttgtaaagccagagtctttgtttacagcaatggaagagcagtctgga 380

                                                                       
Query: 181 tcagatggaatttcagtttgtagatggttagggaccagtcgtgattgctgaaccaagggc 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagacggaatttcagtttgtagatggttagggaccagtcgtgattgctgaaccaagggc 440

                                                  
Query: 241 tgagtccagtgaaacctgacatctgatgaccagaactca 279
           |||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 tgagtccagtgaaacctgacatctgatgaccaaaactca 479


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space:   184676
Effective search space used:   184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)