Query= MSMg01no277_p02.b1 MSMg01no277_p02.b1 CHROMAT_FILE:
MSMg01no277_p02.b1 PHD_FILE: MSMg01no277_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:09 2005
(357 letters)
>mm_chr2_72041497_72042253
Length = 757
Score = 629 bits (325), Expect = 0.0
Identities = 349/357 (97%)
Strand = Plus / Plus
Query: 1 acacctgcctgtttctggtatgatgtaaagccagaatctggtgttttaagcaaaactggg 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 acacctgcctgtttctggtatgatgtaaagccagaatctggtgttttgggcaaaactggg 260
Query: 61 gccatccagaggtttctaagccctcttttcctcttcagtcccctgcccccactcctgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccatccagaggtttctaagccctcttttcctcttcagtcccctgcccccactcctgagt 320
Query: 121 tctgtggcaaatataggctgggtaaggaaagcacagagctgaaccactagagggcgtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtggcaaatataggctgggtaaggaaagcacagagctgaaccactagagggcgtcag 380
Query: 181 ggaccaaagaaagatcctgtggggtgtgacgggccagacaggcaaagcctgaaagaagac 240
|||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 381 ggaccaaagaaagatcttgtggggtgtgactggccagccaggcaaagcctgaaagaagac 440
Query: 241 acttgctctctgttgaggtgacagcttgtgtggcttgcccgtgggtcttttgtctatgtg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 acttgctctctgttgaggtgacagcttgtgtggcttgcccgtgggtcttttgtctacgtg 500
Query: 301 atcgggcagaacaccctacctaagggaagtccaaacaaggagagccagagaataaac 357
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcaggcggaacaccctacctaagggaagtccaaacaaggagagccagagaataaac 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_p02.g1 MSMg01no277_p02.g1 CHROMAT_FILE:
MSMg01no277_p02.g1 PHD_FILE: MSMg01no277_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:09 2005
(670 letters)
>mm_chr2_72222998_72224068
Length = 1071
Score = 745 bits (385), Expect = 0.0
Identities = 403/409 (98%), Gaps = 2/409 (0%)
Strand = Plus / Minus
Query: 1 attctataatgttacatttctttgtta-tttttaaaggcctctatatttgaaccggtagt 59
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 409 attctataatgttacatttctttgttattttttaaaggcctctatatttgaataggtagt 350
Query: 60 aagacctcaatttccatgaaaaaattatacaaatttgaattatgacttttgtttctttct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aagacctcaatttccatgaaaaaattatacaaatttgaattatgacttttgtttctttct 290
Query: 120 tgagttttgattgctcaattgttttaatgtttaatctatgagactcactttaaaattata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgagttttgattgctcaattgttttaatgtttaatctatgagactcactttaaaattata 230
Query: 180 acctttactatgaaaatctaagcatacacaaaacaatataacgtgcctctatactccatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acctttactatgaaaatctaagcatacacaaaacaatataacgtgcctctatactccatg 170
Query: 240 actgagcttcaaaatttatccctgctgatcttgtttaatctgtatagctgcctgttgccc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 169 actgagcttcaaaatttatccctgctgatcttgtttaatctgtatagctgcccattgccc 110
Query: 300 ttcattttactttgaagcaaatccaagaccagctatcattttattcataactatttcaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ttcattttactttgaagcaaatccaagaccagctatcattttattcataactatttcaat 50
Query: 360 atgtatccaagaagtttttttttt-cccccctgagacagggtttctctg 407
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 49 atgtatccaagaagtttttttttttcccccctgagacagggtttctctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1071
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1061
Effective search space: 700260
Effective search space used: 700260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
