CTACCTATCCGGAGAGGATCCGCGGAATTCACTGTTCCTCTGAGTGTGAA
GGCAGAGTTGCCTCCTAGGTTTCAGACCCAGGCATGTTTCAGCGCCCTCC
AGAGCACTTTGCCTGAGATGTTCTGCCCCACCTCCAAGTGAAGTTGTTGA
AAAGATGCTCAAACCACTGGTCCTCATGTCTGTAACAGCAGGGACAGATG
CACAGAACCACACTATTGCCCTCCGCAACTGGAGAAGTTCCTTTAATCTT
TTAAATACCTCAATGTAGGTAAAGATAAATCCTTGGTTTTTACTCTGGAA
TGAATTTCAAGACAAGCCAGCATGAATCATAGTCTGTAATTTACCCCCCT
CCCAAGGCATACAGAGAAAAGTGTGGGCTTCTCAAAGGAGCATTATAAGT
ATCTTAACAATACATATGTATATATATATGTATATACATATAATATACAT
ATATATACACACATATGTAGTGTGCGTGTGTGCGTGTGTGTATGTGTATG
TGCGTGTGTGCATGGACAGACGTATGCGATATACTTTGCTATCATACTTT
TGCATATATGTGCGCTTATATTGTTATATTCTTTTTTGCCCCCACCCCAC
CACCTTATAACACCCAATTTTTTTTGTTTCTCACACCTACTTCTCCCCCT
CCACTTTTTTGAATTTTTTTTTCCCACGGCAAACCATATTACGTTGAGCC
GGTATTTN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACCCTGGCACTAAGCTCTGGGCTA
GATCCTCACTAGTTCATAGCTGATCACTAGAACTCTCCTTTTGGGCTGAC
CCTGATAGAATGGCACGTTTAAGAAGAAGTTAGCTCTGCAAAACAGAAAG
GAAAGCAACACAAGCAGGCAGACTAGGCTCCCACACCTTCTGGCACTTTT
ACCTGATTGCTGCTGTCCACATGCTCTGTCTGGCTGTTGCCTTCTTCCTT
ACAGACAGGATTTTAAACATCTATGAAGCCTGCTCCACAGAGCAATTAGA
GAGCCCCTTATATATTTCACCCCGCCCAATGGCTTTCCAAGCCTTTCCCT
TGCTAGAGAAGAGCCGACCAGCAAAAGCCGCCAATGGGCACCCTCCCCCT
CACAAACTCCACACTCCCATAATGGAAAACAAGAAACCCATTTGCTGCCA
AGACCACCAGTGCCCCAAGCCCCATGCCACCCCTAGATGCTGAGCCCCAG
TCTGAAACAACTGCTCGTGTCCAATGTACTGATTTCCTGAAAACAGGACT
CATAGTGAAAACGTGGAAATTTAACATGGCTCTCCTCAGTAATGGTTTGC
ATTAGCCTTCGGCGAGGCAGCGCCACAAAGTCAACATACTGCCTTTTCCA
GCAGGCGCTGAGGGGAGGAA

Query= MSMg01no278_a20.b1 MSMg01no278_a20.b1 CHROMAT_FILE:
MSMg01no278_a20.b1 PHD_FILE: MSMg01no278_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:17 2005
         (287 letters)



>mm_chr2_106508602_106509288
          Length = 687

 Score =  489 bits (253), Expect = e-143
 Identities = 277/285 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgaaggcagagttgcctcctaggtttcagacccaggcatgtttcagcgccctccagag 60
           |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 tgtgaaggcagagttgcctcctaggtttcagacccaggcatgtttcagtgtcctccagag 260

                                                                       
Query: 61  cactttgcctgagatgttctgccccacctccaagtgaagttgttgaaaagatgctcaaac 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactttgcctgggatgttctgccccacctccaagtgaagttgttgaaaagatgctcaaac 320

                                                                       
Query: 121 cactggtcctcatgtctgtaacagcagggacagatgcacagaaccacactattgccctcc 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 cactggtcctcatgtctgtagcagcagggacagatgcacagaaccacactattgccctcg 380

                                                                       
Query: 181 gcaactggagaagttcctttaatcttttaaatacctcaatgtaggtaaagataaatcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaactggagaagttcctttaatcttttaaatacctcaatgtaggtaaagataaatcctt 440

                                                        
Query: 241 ggtttttactctggaatgaatttcaagacaagccagcatgaatca 285
           |||||| || | |||||||||||||||||||||||||||||||||
Sbjct: 441 ggttttgacacaggaatgaatttcaagacaagccagcatgaatca 485


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space:   188484
Effective search space used:   188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no278_a20.g1 MSMg01no278_a20.g1 CHROMAT_FILE:
MSMg01no278_a20.g1 PHD_FILE: MSMg01no278_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:17 2005
         (286 letters)



>mm_chr2_106670082_106670767
          Length = 686

 Score =  518 bits (268), Expect = e-151
 Identities = 280/284 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   accctggcactaagctctgggctagatcctcactagttcatagctgatcactagaactct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 accctggcactaagctctgggctagatcctcactagttcatagctgatcactagaactct 425

                                                                       
Query: 61  ccttttgggctgaccctgatagaatggcacgtttaagaagaagttagctctgcaaaacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccttttgggctgaccctgatagaatggcacgtttaagaagaagttagctctgcaaaacag 365

                                                                       
Query: 121 aaaggaaagcaacacaagcaggcagactaggctcccacaccttctggcacttttacctga 180
           |||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 364 aaaggaaagcaatacaagcaggcagaccagtctcccacaccttctggcacttttacctga 305

                                                                       
Query: 181 ttgctgctgtccacatgctctgtctggctgttgccttcttccttacagacaggattttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttgctgctgtccacatgctctgtctggctgttgccttcttccttacagacaggattttaa 245

                                                       
Query: 241 acatctatgaagcctgctccacagagcaattagagagcccctta 284
           | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atatctatgaagcctgctccacagagcaattagagagcccctta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space:   187529
Effective search space used:   187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)