Query= MSMg01no278_n21.b1 MSMg01no278_n21.b1 CHROMAT_FILE:
MSMg01no278_n21.b1 PHD_FILE: MSMg01no278_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:19 2005
(219 letters)
>mm_chr2_44170314_44170932
Length = 619
Score = 424 bits (219), Expect = e-123
Identities = 219/219 (100%)
Strand = Plus / Plus
Query: 1 tgctgaatttgaggaaatataatcatcctaaaattggttgccccaaataataattccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctgaatttgaggaaatataatcatcctaaaattggttgccccaaataataattccctt 260
Query: 61 ttaaagttttcttacagtcttaaaagtcaatgttttccaaacttcctctccatgtgaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaagttttcttacagtcttaaaagtcaatgttttccaaacttcctctccatgtgaggt 320
Query: 121 caggataccagaagtcccagaaaaaaaaccaaacaaacaaaatacaattgtagtaacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggataccagaagtcccagaaaaaaaaccaaacaaacaaaatacaattgtagtaacaag 380
Query: 181 aaaagacaatattttcactttctctgaatgtatttaagg 219
|||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagacaatattttcactttctctgaatgtatttaagg 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no278_n21.g1 MSMg01no278_n21.g1 CHROMAT_FILE:
MSMg01no278_n21.g1 PHD_FILE: MSMg01no278_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:20 2005
(324 letters)
>mm_chr2_44336882_44337605
Length = 724
Score = 584 bits (302), Expect = e-171
Identities = 319/325 (98%), Gaps = 2/325 (0%)
Strand = Plus / Minus
Query: 1 ctatc-atccatccatctgtctgtctatcatgtatttatcagagaaaccaacataaaagg 59
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 532 ctatctat-catccatctgtctgtctatcatgtatttatcagtgaaaccaacataaaagg 474
Query: 60 aacacaacagcaaaggaaaaggagacaagggaggatatatgggataaatatgagccaagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aacacaacagcaaaggaaaaggagacaagggaggatatatgggataaatatgagccaagt 414
Query: 120 acaatagtgtgtgtgtgtaagtgtcaagtgaagacatcatttatgctttatacaactgaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acaatagtgtgtgtgtgtaagtgtcaagtgaagacatcatttatgctttatacaactgaa 354
Query: 180 gagcaagaatcaaaaaaataaaacactgtagaaaatcaaataagagactcatatgctttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gagcaagaatcaaaaaaataaaacactgtagaaaatcaaataagagactcatatgctttc 294
Query: 240 catgttatagattaggatttagganatataaacgttcaagaactttttttatgtgacttt 299
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 293 catgttatagattaggatttaggaaatataaacgttcaaaaactttttttatgtgacttt 234
Query: 300 tgattaaatgaagtagttgtttaat 324
||||||||||||||| |||||||||
Sbjct: 233 tgattaaatgaagtacttgtttaat 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
