Query= MSMg01no280_m05.b1 MSMg01no280_m05.b1 CHROMAT_FILE:
MSMg01no280_m05.b1 PHD_FILE: MSMg01no280_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:41 2005
(639 letters)
>mm_chr2_86174031_86175069
Length = 1039
Score = 1131 bits (585), Expect = 0.0
Identities = 625/641 (97%), Gaps = 8/641 (1%)
Strand = Plus / Minus
Query: 4 ggaattctaaggatta---acttattttttatcatatatagataacatttatttttattg 60
||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggaattctaagga--aaagaattattttttatcatatatagataacatttatttttattg 904
Query: 61 aaattgttattgaaaacacacagtataatctatttttaatgattttataaaaagacaaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 903 aaattgttattgaaaacacacagtataatctatttttaatgattttataaaaagac-aaa 845
Query: 121 aaaactaaatatattctttataatatctcctgtagttatcaggcaattcaattggatcta 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 844 aaaactaaatatattctttatcatatctcctgtagttatcaggcaattcaattggatcta 785
Query: 181 agtttctatatttctcaaaggaggaagacatgcgtggatactggtaagcaataagtaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 agtttctatatttctcaaaggaggaagacatgcgtggatactggtaagcaataagtaggt 725
Query: 241 cctatgatcataagtaacatttaatcaatttagtttcaagttataattaatgagatgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cctatgatcataagtaacatttaatcaatttagtttcaagttataattaatgagatgtaa 665
Query: 301 gtttaatgcaatgagatgtgtggttttactttcctcacagtaaacttagagccttttcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gtttaatgcaatgagatgtgtggttttactttcctcacagtaaacttagagccttttcct 605
Query: 361 accattttatttaccaattattatttctgtgtgttgcttgttttgtctcttaaggcaatt 420
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 604 accattttatttaccaattattatttcggtgtattgcttgttttgtctcttaaggcaatt 545
Query: 421 ttgttgctcaaaatatctataaagtaggagactagtttgtaggtagtttataccttcatc 480
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 544 ttgttgctcaaaatatctataaagtaggagactagttggtaggtagtttattccttcatc 485
Query: 481 atctcagaaatccttcaaggacaggttagttatacatccataagaataatgttctttagt 540
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 484 atctcagaaatccctcaaggacaggttagttatacatccataagtataatgttctttagt 425
Query: 541 aaacagcatttttgccaaaataaacttttgttagaattataaactaagataaagcactga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaacagcatttttgccaaaataaacttttgttagaattataaactaagataaagcactga 365
Query: 601 taatattgatgaataaacatatatatat--tatatatatat 639
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 364 taatattgatgaataaacatatatatatattatatatatat 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_m05.g1 MSMg01no280_m05.g1 CHROMAT_FILE:
MSMg01no280_m05.g1 PHD_FILE: MSMg01no280_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:41 2005
(239 letters)
>mm_chr2_86018266_86018903
Length = 638
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 1 atgtaatctttataaatctttataaatataatgcaaccatgacatatagattaaaggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtaatctttataaatctttataaatataatgcaaccatgacatatagattaaaggtga 260
Query: 61 aaattacatggtataattctttctatctaatttaagcattcttctctattaaaaatcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattacatggtataattctttctatctaatttaagcattcttctctattaaaaatcaac 320
Query: 121 ataggtggtggtaaacagtatgccaattcaaaattggatgttataattttttagagtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 ataggtggtggtaaacagtatgccaattcaaaattggatgttataattttt-agagtgtt 379
Query: 181 ttgtttgtttgttaatgacagaaaattaaactgaaacaagcctgagtgaaacacataat 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgtttgtttgttaatgacagaaaattaaactgaaacaagcctgagtgaaacacataat 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
