CTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAACTTTCTCCTAAAGTTTTTAAGCTACAGTAAATATTCTAAATTG
ATATAAATGCCTCTATAATATACAAGCAACTTCTGTAAAAGCTGCACATG
CCATCCTGACAAACACTATGCTACATTGCAATACTTCAGTGTTTCAAATA
AAACGGATAAACATATAGGCTAACTGACCAAATAAACTAAGAACTAATAA
AAACACCCATACATATAGTAATTACAACATGATGTTTAATTAATTTGGTG
CAAACATCTATAGGGAAAGGACTGGTCTTTTTTGAGTGTTATGAAGTTAC
TTGAGTATATAAAATAATGAAAACAAAACAAGTAACCTGAAAGATGACGT
TATATACTATTTTAAGGCTGACTTAAGGTAGATATGAATTATGTTAACAA
ACTGCTAATGTTCACAGAAGTTGGTGGAACTCATTATGGTTTTGATGTCT
GGTATACATGAGCTGAACAGTATCCTCCAATGAAGAAAAAAATAGCTTCA
TCCTATGTAGTCAAAAAGCTGAGCAATTAGCTTAATTTGAGTTTTAAAAA
CCACTCAAAATCATCATTAATTAGAAAAAGAGTAAACACGAATGAAATGC
CTCTCCATCTTCATTAGATACGAGAGTTTGATGTACAGTATTCTCCAATG
GCTCATATGTTCAAAGTTTGAGCTCCAGNTGGN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAACACCTGAAAAAATGTTCACCATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACACTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAATGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCTTATATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTACGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACAGAATGGAGTATTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGAAACTCACACAATATGTACTCACTGATAG
TGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGC
TAAACACATGAAACTCAAGAAGAATGAAGACTGAT

Query= MSMg01no280_m11.b1 MSMg01no280_m11.b1 CHROMAT_FILE:
MSMg01no280_m11.b1 PHD_FILE: MSMg01no280_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:42 2005
         (683 letters)



>mm_chr2_43283012_43284095
          Length = 1084

 Score = 1261 bits (652), Expect = 0.0
 Identities = 673/680 (98%), Gaps = 1/680 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaactttctcctaaagtttttaagctacagtaaatattctaaattgatataaatg 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gaattcaactttcacctaaagtttttaagctacagtaaatattctaaattgatataaatg 825

                                                                       
Query: 65  cctctataatatacaagcaacttctgtaaaagctgcacatgccatcctgacaaacactat 124
           ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 824 cctctatcatatagaagcaacttctgtaaaagctgcacatgccgtcctgacaaacactat 765

                                                                       
Query: 125 gctacattgcaatacttcagtgtttcaaataaaacggataaacatataggctaactgacc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gctacattgcaatacttcagtgtttcaaataaaacggataaacatataggctaactgacc 705

                                                                       
Query: 185 aaataaactaagaactaat-aaaaacacccatacatatagtaattacaacatgatgttta 243
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aaataaactaagaactaataaaaaacacccatacatatagtaattacaacatgatgttta 645

                                                                       
Query: 244 attaatttggtgcaaacatctatagggaaaggactggtcttttttgagtgttatgaagtt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 644 attaatttggtgcaaacatctatagggaaaggactggtcttttttgagtgttaggaagtt 585

                                                                       
Query: 304 acttgagtatataaaataatgaaaacaaaacaagtaacctgaaagatgacgttatatact 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acttgagtatataaaataatgaaaacaaaacaagtaacctgaaagatgacgttatatact 525

                                                                       
Query: 364 attttaaggctgacttaaggtagatatgaattatgttaacaaactgctaatgttcacaga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 attttaaggctgacttaaggtagatatgaattatgttaacaaactgctaatgttcacaga 465

                                                                       
Query: 424 agttggtggaactcattatggttttgatgtctggtatacatgagctgaacagtatcctcc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 agttggtggaactcattatggttttgatgtctggtatacatgagctgaacagtatcctcc 405

                                                                       
Query: 484 aatgaagaaaaaaatagcttcatcctatgtagtcaaaaagctgagcaattagcttaattt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aatgaagaaaaaaatagcttcatcctatgtagtcaaaaagctgagcaattagcttaattt 345

                                                                       
Query: 544 gagttttaaaaaccactcaaaatcatcattaattagaaaaagagtaaacacgaatgaaat 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gagttttaaaaaccactcaaaatcatcattaattagaaaaagagtaaacacgaatgaaat 285

                                                                       
Query: 604 gcctctccatcttcattagatacgagagtttgatgtacagtattctccaatggctcatat 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gcctctccatcttcattagatacgagagtttgatgtacagtattctccaatggctcatat 225

                               
Query: 664 gttcaaagtttgagctccag 683
           ||||||||||||||| ||||
Sbjct: 224 gttcaaagtttgagccccag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space:   722802
Effective search space used:   722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)