Query= MSMg01no288_m03.b1 MSMg01no288_m03.b1 CHROMAT_FILE:
MSMg01no288_m03.b1 PHD_FILE: MSMg01no288_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:54 2005
(291 letters)
>mm_chr2_84843445_84844135
Length = 691
Score = 509 bits (263), Expect = e-148
Identities = 284/291 (97%)
Strand = Plus / Minus
Query: 1 gttgcccagacataacttaccaaagttaaagatggccttgttcctcacaccctttccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gttgcccagacataacttaccaaagttaaagatggccttgttcctcacaccctttccctg 432
Query: 61 acctccaggccctccttccagctcagtggctctgcttcattcagcatcccctacggggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 431 acctccaggccctccttccagctcagtggctctgcttcattcagcatcccctagggggtc 372
Query: 121 actttcattgtcccctgggcctcactctctggagaagagactcctgccttccctcactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 actttcattgtcccctgggcctcactctctggagaagagactcctgccttccctcactct 312
Query: 181 gcccacagggatcacctttgagtcagttccccctgagagtattttcactgaatggttctt 240
||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 311 gcccacagggatcacctttgagtcagtaccccctgagagtatttccactgaatggttctc 252
Query: 241 attcttcctcagcacgttcagcactcaggccttgcccaggtacaggcaggg 291
| |||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 251 agtcttcctcagcaggttcagcactcaggccttgcccaggcacaggcaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no288_m03.g1 MSMg01no288_m03.g1 CHROMAT_FILE:
MSMg01no288_m03.g1 PHD_FILE: MSMg01no288_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:54 2005
(176 letters)
>mm_chr2_84675835_84676411
Length = 577
Score = 323 bits (167), Expect = 4e-93
Identities = 173/175 (98%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 2 tatctgcagacatcaacttacacattacccttaaagaccatttcccgagctcctgactgg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tatctgcagacatcaacttacacattacccttaaagaccatttcccgagctcctgactgg 261
Query: 62 gtccagctcccctcccggagtacattccccagttatacactcctaccatggcccttgttc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtccagctcccctcccggagtacattccccagttatacactcctaccatggcccttgttc 321
Query: 122 tgcctccccaaacctcaggtgctctcctgaatagaatcttttttttttt-aattt 175
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 322 agcctccccaaacctcaggtgctctcctgaatagaatcttttttttttttaattt 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 577
Length adjustment: 8
Effective length of query: 168
Effective length of database: 569
Effective search space: 95592
Effective search space used: 95592
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
