Query= MSMg01no289_k19.b1 MSMg01no289_k19.b1 CHROMAT_FILE:
MSMg01no289_k19.b1 PHD_FILE: MSMg01no289_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:02 2005
(602 letters)
>mm_chr2_77469412_77470413
Length = 1002
Score = 1056 bits (546), Expect = 0.0
Identities = 588/606 (97%), Gaps = 8/606 (1%)
Strand = Plus / Minus
Query: 1 actaaacatactagtaattttcaactgctgtcataaaaagtctagttgtagccttttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 actaaacatactagtaattttcaactgctgtcataaaaagtctagttgtagccttttatt 743
Query: 61 attctgctgaattacatttgagaataagaagctagctacttcacctttggatagtagtac 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 742 attctgctgaattacatttgagaaaaagaagctagctacttcacctttggatagtagtac 683
Query: 121 attctagaccacattcttagaatacagttatagaaattaagctcgtcatagttttccctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 attctagaccacattcttagaatacagttatagaaattaagctcgtcatagttttccctt 623
Query: 181 gaggagacattatttagtttgtgtcatttaccatgtacagataaaggtttatattcagct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaggagacattatttagtttgtgtcatttaccatgtacagataaaggtttatattcagct 563
Query: 241 acagtgatgttgacgcccatctacacaaggtctcttagtgacatcaatcaa----cccca 296
||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 562 acagtgatgttgatgcccatctacacaaggtctcttagtgacatcaatcaattgg----a 507
Query: 297 cataggagtttatagccacaaatagctggacatcaatcatttcctgctgacatggcttgg 356
|||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||
Sbjct: 506 gataggagtttatagccacaaatagctggacataaatcatttcctgttgacatgacttgg 447
Query: 357 gcactgtgccttcgtggatcttgaaggttacactggttgcatttatgattgttttcagtc 416
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 446 gcactgtgccttcgtggatcttgaaggttacactggttggatttatgattgttttcagtc 387
Query: 417 ggttattcaatagcaaaaggaccaaatattaggagagacaaagatcaccttctccacagg 476
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 386 ggttattcaatagcaaaaggaccaaatattaggagagacaaaggtcaccttctccacagg 327
Query: 477 attagagaacagaagactctcacttagcatcactgataggaaccatgaaaacagctcagt 536
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 attagagaatagaagactctcacttagcatcactgataggaaccatgaaaacagctcagt 267
Query: 537 gtggaagtcaccacctgagtgcagcatcgcctacttgtcctgagaaaatctttcacaaat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtggaagtcaccacctgagtgcagcatcgcctacttgtcctgagaaaatctttcacaaat 207
Query: 597 gattct 602
||||||
Sbjct: 206 gattct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_k19.g1 MSMg01no289_k19.g1 CHROMAT_FILE:
MSMg01no289_k19.g1 PHD_FILE: MSMg01no289_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:02 2005
(234 letters)
>mm_chr2_77295977_77296610
Length = 634
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 gaagcaataaaccctggcggggtgcactctaccacgctcaaatcaaagggaaatggctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaagcaataaaccctggcggggtgcactctaccacgctcaaatcaaagggaaatggctga 260
Query: 61 ttaactccccagagagtgcacctaataagctatacactctaaatgacgctatccagctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaactccccagagagtgcacctaataagctatacactctaaatgacgctatccagctca 320
Query: 121 ggaaggcaagtgctttgtacactgacatgactaacatataaagtgattaaaaaaataccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaggcaagtgctttgtacactgacatgactaacatataaagtgattaaaaaaataccc 380
Query: 181 aattttctttaaaattaatacatataggaattaaaccccttagaacgtttttgt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattttctttaaaattaatacatataggaattaaaccccttagaacgtttttgt 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
