Query= MSMg01no290_l23.b1 MSMg01no290_l23.b1 CHROMAT_FILE:
MSMg01no290_l23.b1 PHD_FILE: MSMg01no290_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:23 2005
(636 letters)
>mm_chr2_167169711_167170745
Length = 1035
Score = 1137 bits (588), Expect = 0.0
Identities = 614/623 (98%), Gaps = 1/623 (0%)
Strand = Plus / Plus
Query: 14 gaattctgttcagtttatgcttgaccacacggagagtttgaggctagcctgggctacatg 73
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaattctgttcagttcatgcttgaccacacggagagtttgaggctagcctgggctacatg 273
Query: 74 agaccatgtctcaacagaacaacatctgtgaacctgagacagaaaaagaacactgaaggg 133
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 274 agaccatgtctcaacagaacaacatttgtgaacctgagacagaaaa-gaacactgaaggg 332
Query: 134 gaaagaaagtgtcttagcaggaggtttttcatttcccaaagcaatcagattccccaatct 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaaagaaagtgtcttagcaggaggtttttcatttcccaaagcaatcagattccccaatct 392
Query: 194 gtatttcctccagaaaattcatatattaaggacatggagacattcagaaggcatttttaa 253
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 393 gtatttcctccagaaaattcatatagtaaggacatggagacattcagaaggcatttttaa 452
Query: 254 ggcagaaacaacaaagggttttcctgacatgacgtatgtaagggaatctgaacagtccag 313
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 453 ggcagaaacaacaaagggttttcctgccgtgacgtatgtaagggaatctgaacagtccag 512
Query: 314 tatttatcagaaaaacatctatttgattatgtagcaagtgtactttctctataatcttca 373
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 513 tatttatcagaaaaacatctatttggttatgtagcaagtgtactttctctataatcttca 572
Query: 374 gtccagtacttctttagaatattaacaaactactagcactccatatactaaatcattcat 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gtccagtacttctttagaatattaacaaactactagcactccatatactaaatcattcat 632
Query: 434 tatcttgattgaggtataattgtcttttaacacacaggactcgcccatagactcaaaggg 493
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tatcttgattgagatataattgtcttttaacacacaggactcgcccatagactcaaaggg 692
Query: 494 cactggcagaacaattcanagttcaaagcctgtttaggctacagagtgagtgaaatcctg 553
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cactggcagaacaattcaaagttcaaagcctgtttaggctacagagtgagtgaaatcctg 752
Query: 554 ccttgatttcacagttgtttttaaagatttgttgattctatgtatgagtgctctgtctgc 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ccttgatttcacagttgtttttaaagatttgttgattctatgtatgagtgctctgtctgc 812
Query: 614 atgtacacttgcatgccagaagg 636
|||||||||||||||||||||||
Sbjct: 813 atgtacacttgcatgccagaagg 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1035
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1025
Effective search space: 641650
Effective search space used: 641650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_l23.g1 MSMg01no290_l23.g1 CHROMAT_FILE:
MSMg01no290_l23.g1 PHD_FILE: MSMg01no290_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:23 2005
(239 letters)
>mm_chr2_167338762_167339400
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 233/235 (99%)
Strand = Plus / Minus
Query: 1 tgctgcttctaagaggcttcagtgcccaaaaaccaagcaaggcttttgaaagtgaagagt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 435 tgctgcttctaagaggcttcagtgccccaaaaccaagcaaggcttttgaaagtgaagagt 376
Query: 61 ccagtggacgtgacagtcacacactcaccttcagtgaggcaaaactctgagtggttttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccagtggacgtgacagtcacacactcaccttcagtgaggcaaaactctgagtggttttag 316
Query: 121 caaagacattacctctgcagttagtgaaaggtcagtcttggagaataaatgtttgttttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 caaagacattacctctgcagttagtgaaaggtcagtcttggagaataaatgtttgttttc 256
Query: 181 tccgctctgaaacaagtctctagcctgggctggtcttgagttcttgatcctcctg 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tccgctctgaaacaagtctctagcctgggctggtcttgagttcttgatcctcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|