Query= MSMg01no290_m16.b1 MSMg01no290_m16.b1 CHROMAT_FILE:
MSMg01no290_m16.b1 PHD_FILE: MSMg01no290_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:26 2005
(227 letters)
>mm_chr2_41428573_41429199
Length = 627
Score = 439 bits (227), Expect = e-128
Identities = 227/227 (100%)
Strand = Plus / Minus
Query: 1 aggttactcgcacacaggtaggcaattttctgctacttatttgctttgttttgttttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aggttactcgcacacaggtaggcaattttctgctacttatttgctttgttttgttttgtt 368
Query: 61 aataaaaagcttctaactgtggcctggagacctacatgaatccatatttgctattgaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aataaaaagcttctaactgtggcctggagacctacatgaatccatatttgctattgaggc 308
Query: 121 ttttagaaactaaaattatttctagatcagaaaacattcatagaagtccattcttctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttttagaaactaaaattatttctagatcagaaaacattcatagaagtccattcttctcag 248
Query: 181 atcttaccttatctagctagaagcagaaaactatggaaaatgaggct 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atcttaccttatctagctagaagcagaaaactatggaaaatgaggct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no290_m16.g1 MSMg01no290_m16.g1 CHROMAT_FILE:
MSMg01no290_m16.g1 PHD_FILE: MSMg01no290_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:26 2005
(235 letters)
>mm_chr2_41257314_41257947
Length = 634
Score = 427 bits (221), Expect = e-124
Identities = 230/233 (98%), Gaps = 1/233 (0%)
Strand = Plus / Plus
Query: 1 taaaaccaagtatatccttcagagaatgacagtaattgtttggagatcatataatataaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 taaaaccaagtatatccttcagagaatgacagtaattgtttggagataatataatataaa 260
Query: 61 tgtcaactcacataaagttagaacaaacagaatatgctaaataaaaatgtaaacagctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcaactcacataaagttagaacaaacagaatatgctaaataaaaatgtaaacagctgg 320
Query: 121 cagaggagaaacacatgatctttataaagaactcaagctgtgaaattctgaacaagtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaggagaaacacatgatctttataaagaactcaagctgtgaaattctgaacaagtatc 380
Query: 181 ttgaactttatgaatcaacacatgttggcttatttttttaccccccatttatc 233
||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 381 ttgaactttatgaatcaacacatgttggcttatttttttgccccc-atttatc 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 634
Length adjustment: 9
Effective length of query: 226
Effective length of database: 625
Effective search space: 141250
Effective search space used: 141250
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
