Query= MSMg01no292_o17.b1 MSMg01no292_o17.b1 CHROMAT_FILE:
MSMg01no292_o17.b1 PHD_FILE: MSMg01no292_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:08 2005
(322 letters)
>mm_chr2_91494458_91495179
Length = 722
Score = 547 bits (283), Expect = e-160
Identities = 307/315 (97%)
Strand = Plus / Minus
Query: 5 gaattcagagagcatacctggagatcaagcatagctttctaacttcaaagctattaggcc 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcagagagcagagctggagatcaagcatagctttctaacttcaaagctattaggcc 460
Query: 65 aatgcctcccacatcacggctgcagtggaagacaatgggtctgtaggtcaaggaagcagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aatgcctcccacatcacggctgcagtggaagacaatgggtctgtaggtcaaggaagcagt 400
Query: 125 ggcaggtgcaagccaatcaaaaccaacccacgctcagtaagggaaggtacgtatgcacga 184
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 399 ggcaggtgcaagccaatcgaaacctacccacgctcagtaagggaaggtacgtatgcacga 340
Query: 185 gagcagaccagaggctacaaaacatgttctttcttggtggcataagaggcttctctacac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gagcagaccagaggctacaaaacatgttctttcttggtggcataagaggcttctctacac 280
Query: 245 caggagcacagactatgaggaaagaggtacaacacattgcatgcttaccggctacttcca 304
|||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 279 caggggcacagactatgaggaaagaggtacgacacagggcatgcttaccggctacttcca 220
Query: 305 caatctggtgccggg 319
|||||||||||||||
Sbjct: 219 caatctggtgccggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_o17.g1 MSMg01no292_o17.g1 CHROMAT_FILE:
MSMg01no292_o17.g1 PHD_FILE: MSMg01no292_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:08 2005
(217 letters)
>mm_chr2_91299473_91300091
Length = 619
Score = 412 bits (213), Expect = e-120
Identities = 217/219 (99%), Gaps = 2/219 (0%)
Strand = Plus / Plus
Query: 1 actgctccagagctgctgtcaaaattgcgtacattacatttgcaatggaggatgggggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgctccagagctgctgtcaaaattgcgtacattacatttgcaatggaggatgggggtg 260
Query: 61 agaacaggagcagagaatcgtggattcttaatgttttgcagtgggaaagaaaaaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacaggagcagagaatcgtggattcttaatgttttgcagtgggaaagaaaaaaaaaaa 320
Query: 121 --caacattagagggttctcagtaactagttgaggttcatttttaaaggagaaggtttaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaacattagagggttctcagtaactagttgaggttcatttttaaaggagaaggtttaa 380
Query: 179 tagaaatttctaagttgagacttcctgtgcatacggagt 217
|||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaaatttctaagttgagacttcctgtgcatacggagt 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 619
Length adjustment: 9
Effective length of query: 208
Effective length of database: 610
Effective search space: 126880
Effective search space used: 126880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
