Query= MSMg01no295_h24.b1 MSMg01no295_h24.b1 CHROMAT_FILE:
MSMg01no295_h24.b1 PHD_FILE: MSMg01no295_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:27 2005
(325 letters)
>mm_chr2_89880469_89881194
Length = 726
Score = 601 bits (311), Expect = e-176
Identities = 320/323 (99%), Gaps = 1/323 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaaatgcccctcaaccagaaggatcctaagtaccgttatatggtgaacacccag 63
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 ggaattcaaatgcccctcaaccagaaggatcctaagtacctttatatggtgaacacccag 263
Query: 64 aattgtttcttgtatgatttgcaggtgattacaatacatgaccaccattaaggatgtttg 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acttgtttcttgtatgatttgcaggtgattacaatacatgaccaccattaaggatgtttg 323
Query: 124 ttccttggtagatcacaataagattcagctttagggaagggctgactgtggaaaacctgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttccttggtagatcacaataagattcagctttagggaagggctgactgtggaaaacctgt 383
Query: 184 ctagggttctcgaggaaatagcatgtgggaggtttgcagttcctttgcacattgcttcaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctagggttctcgaggaaatagcatgtgggaggtttgcagttcctttgcacattgcttcaa 443
Query: 244 caaaatgcctaaagctgaagttt-tttttaaactgttcattcagaaagaagattattcat 302
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaaatgcctaaagctgaagtttctttttaaactgttcattcagaaagaagattattcat 503
Query: 303 tagcaagtttcagctgtgtctct 325
|||||||||||||||||||||||
Sbjct: 504 tagcaagtttcagctgtgtctct 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space: 226572
Effective search space used: 226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_h24.g1 MSMg01no295_h24.g1 CHROMAT_FILE:
MSMg01no295_h24.g1 PHD_FILE: MSMg01no295_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:27 2005
(293 letters)
>mm_chr2_89946844_89947536
Length = 693
Score = 567 bits (293), Expect = e-166
Identities = 293/293 (100%)
Strand = Plus / Minus
Query: 1 atggaaagagctcagcatggagattgaaatgatctaaatacaacacatgctctaagccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atggaaagagctcagcatggagattgaaatgatctaaatacaacacatgctctaagccca 371
Query: 61 caaaaccttcattttccacccctccccccccaactctgcctctactcccaagaagcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caaaaccttcattttccacccctccccccccaactctgcctctactcccaagaagcttaa 311
Query: 121 agtcatgtggtaggtctagggctccacacagatatagtacaaccctgaaaactataactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agtcatgtggtaggtctagggctccacacagatatagtacaaccctgaaaactataactt 251
Query: 181 ttgcttagagttttaagagaactttacttgagttaagaatgcctcacttggtggatgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgcttagagttttaagagaactttacttgagttaagaatgcctcacttggtggatgctc 191
Query: 241 acaaccatccattggactgagcataggatccccaatgaaggagctagagaaag 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 acaaccatccattggactgagcataggatccccaatgaaggagctagagaaag 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
