Query= MSMg01no295_i23.b1 MSMg01no295_i23.b1 CHROMAT_FILE:
MSMg01no295_i23.b1 PHD_FILE: MSMg01no295_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:31 2005
(382 letters)
>mm_chr2_112102133_112102912
Length = 780
Score = 704 bits (364), Expect = 0.0
Identities = 377/382 (98%), Gaps = 2/382 (0%)
Strand = Plus / Minus
Query: 1 aggattccaaacagcatgggaaggcttcaaggcttacagattgacgcgtatggttgctga 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 580 aggattccaaacagcatgggaaggcttcaaggcttacagattgacgcgtttggttgctga 521
Query: 61 taatcggccgaggcatgagcagcgtaaaagattaacgagccctcagaggacaggacgcgg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 taataggccgaggcatgagcagcgtaaaagattaacgagccctcagaggacaggacgcgg 461
Query: 121 ttgctgggtcatgagcaccttgaagcgtttcttgatggtgattcggtgtcttgaatattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttgctgggtcatgagcaccttgaagcgtttcttgatggtgattcggtgtcttgaatattt 401
Query: 181 gtcatctggggagaaccgagcaggatgggcggagcaagtctgttgtcccatagggtcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gtcatctggggagaaccgagcaggatgggcggagcaagtctgttgtcccatagggtcaaa 341
Query: 241 tttctgctcaaggaaaaataaaaaatatctcaatatatgagtggtgtgatagaaagaaac 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 340 tttctgctcaaggaaaaataaaaaatatctca--atatgagtggtgtgatagaaagaaac 283
Query: 301 aagaaaatgggtaacctgaggccaggagatcgcgtggtcagaaaaagaagccactgccta 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aagaaaatgggtgacctgaggccaggagatcgcgtggtcagaaaaagaagccactgccta 223
Query: 361 tctaccacgttttggctccgac 382
||||||||||||||||||||||
Sbjct: 222 tctaccacgttttggctccgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 780
Length adjustment: 9
Effective length of query: 373
Effective length of database: 771
Effective search space: 287583
Effective search space used: 287583
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_i23.g1 MSMg01no295_i23.g1 CHROMAT_FILE:
MSMg01no295_i23.g1 PHD_FILE: MSMg01no295_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:31 2005
(663 letters)
>mm_chr2_111997828_111998889
Length = 1062
Score = 1243 bits (643), Expect = 0.0
Identities = 658/663 (99%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 1 aagacttctatcatctgaattagttcactgacaggcagatttgaccatttctaacagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagacttctatcatctgaattagttcactgacaggcagatttgaccatttctaacagttt 260
Query: 61 tacatgaagttataattgaaaattaagctttgtggtcaattacagagaaaaacaggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatgaagttataattgaaaattaagctttgtggtcaattacagagaaaaacaggaaaa 320
Query: 121 atctaataattttagactgcatatttttgagactatacaatgtagattactattgcacat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 atctaataattttagactgcatatttttgagactatacaatgtagattactattgcacgt 380
Query: 181 atgtatatgaaaaatgttacatcttctctttgtctagtcattgttttgacaaagaagtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtatatgaaaaatgttacatcttctctttgtctagtcattgttttgacaaagaagtat 440
Query: 241 gtgtgacttgtagggtccgtatgaatactttgaatattttgtagctaaaaggtgaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtgacttgtagggtccgtatgaatactttgaatattttgtagctaaaaggtgaaaata 500
Query: 301 ctgcattatcaataaaatacaaaataatatttttgtaggccttgcttattattatgtaaa 360
||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 501 ctgtattatcaataaaatacaaaataatatttt-gtaggccttgcttataattatgtaaa 559
Query: 361 aagtacagaaattaggatagaaaataattacaaactattaaaaatagaaatattaaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagtacagaaattaggatagaaaataattacaaactattaaaaatagaaatattaaaaca 619
Query: 421 agatgagaaatatattatgcttttcatataacatatgatttctttacatataatctttgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agatgagaaatatattatgcttttcatataacatatgatttctttacatataatctttgc 679
Query: 481 agttaagacaaacttgagggaagtttcctcactaattgtattaccaggtgattcaaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agttaagacaaacttgagggaagtttcctcactaattgtattaccaggtgattcaaacca 739
Query: 541 ggtgtcacctgaatacactgttttgtcatgtttgggttatacaactgacaagaaacagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggtgtcacctgaatacactgttttgtcatgtttgggttatacaactgacaagaaacagac 799
Query: 601 ctgccatgcatgggttcccaaattacctacagcactccttgcaagaaactatgagaaaat 660
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 800 ctgccatgcatgggttcccaaattacctgcagcactccttgcaagaaactatgagaaaat 859
Query: 661 cag 663
|||
Sbjct: 860 cag 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1062
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1052
Effective search space: 686956
Effective search space used: 686956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
