Query= MSMg01no296_i20.b1 MSMg01no296_i20.b1 CHROMAT_FILE:
MSMg01no296_i20.b1 PHD_FILE: MSMg01no296_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:46 2005
(339 letters)
>mm_chr2_40795596_40796334
Length = 739
Score = 485 bits (251), Expect = e-141
Identities = 313/339 (92%), Gaps = 9/339 (2%)
Strand = Plus / Plus
Query: 1 tgtgttctactggttttctccttttgattcagtataggacctcagactacaatatgttgt 60
||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 210 tgtgttctactggttttctccttttgattcagtataggacctcggcctacgatatgttgt 269
Query: 61 gacaatatgttgtgacagtcagttaaaccttcctggaagtaccctgacaggtgcactaga 120
| | | ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 270 ggc---------tcacaatcagttaaaccttcctggaagtaccctgacagatgcactaga 320
Query: 121 ggcttgaagtgatctactgcactgacaaccaatgttacctatcacagatgcatagtactt 180
||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||
Sbjct: 321 ggcttgaagtgatctactgcattgacaaccaatactacctatcacagatgcatattactt 380
Query: 181 agtttatcaataataatagtgctagtgatgaatgttactttgatcattttattaatggta 240
||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 agtttatcatttataatagtgctagtaatgaatgttactttgatcattttattaatggta 440
Query: 241 tggtttaattcttgaaaaggtcaaataattactcaaggtgaccaaaaattgcttaagact 300
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggtttaattcttgacaaggtcgaataattactcaaggtgaccaaaaattgcttaagact 500
Query: 301 caatatgcccaagatctatcttaattgtttcgatatttt 339
||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 caatatgcccaagatctatgttaattgtttcgatatttt 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_i20.g1 MSMg01no296_i20.g1 CHROMAT_FILE:
MSMg01no296_i20.g1 PHD_FILE: MSMg01no296_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:46 2005
(193 letters)
>mm_chr2_40953601_40954193
Length = 593
Score = 342 bits (177), Expect = 6e-99
Identities = 186/189 (98%)
Strand = Plus / Minus
Query: 1 tgccaatgctctttttgagggggtagtggttttgaggagtatttgtttattggaaggaat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 389 tgccaatgctctttttgagggggtagtggttttgaggaatatttgtttattggaaggaat 330
Query: 61 aacacctttttcatagaaatgtacatttttgtgtacattgtgagagtggactactataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aacacctttttcatagaaatgtacatttttgtgtacattgtgagagtggactactataaa 270
Query: 121 gcaaatagtccttcactctgttttttatgtccttgcttacttggccctccacatttctac 180
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 269 gcaaagagtccttcactctgttttttatgtccttgcttacttggccctccacatttttac 210
Query: 181 cttgttgca 189
|||||||||
Sbjct: 209 cttgttgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
