TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAAATCCGCGGAA
TTCATACTTCTCTCAGCCTGATTAATGATGCTATAAAGTTTGTGTGACTG
CTACTCATGAAACTTTGGTCTATTCAGTGTCATATAGAAAACATTTTGTA
TTGGACACTGTAATTTTGACCTCAGACTGGATGATTGACATAGAGTTTGT
TTCCCACAGAGACATCAGAGTGCCTTGAGCTTAAGACATCCCCAGAGGGT
ATAAGTTGAAAAGAAAATTTTAAGCAACTTTATTAGGAACAAATAAGTAT
ACTCAAACACTCAGAAGACAACTAAATCACATTTTCTTTCTCTAACTGCA
ATCTTGGATGTTTATGAAGACATGAAGTCATTAAAAACTGTGAGAAGGGG
GTTTTGACTAGGATCACGCCGACAGTTCTCACCACACACAGTAGAGTCTG
GGGAGGTCAGGATTATATTCAATTTTATTTTCAGTGCTTTGGACTTTATT
GTGCATAATGCACCCTCTTATATTGACTGGTTATAAATCTGTAATTATAT
GGCTGTCTAGAAAATTCTCAAAAATTTAAAAAATTATAGAGTTTTTCAAC
TTGCAGGAATTTTTTTTCCAGCCTGTGCCTCATAGGTGATGCCACGTAAA
TGATATTGATCATGTCTACCAAGGTAGCGAAATCATGCCCCTTATTCAAG
ATTCAGTCAAATGCTGCTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTCGTCTTTCCAAGATTTACACCATGAA
CAGATGTTGAATTTTGTTCAATGCTTTTTCAGCATCTAATGAAATGATCA
TGTGGGTTTTTTTTTCCTTTGGGATTGTTTATGTAGTAGATCACATTGAT
AGATTTCCATATATTGAACCATCCCCAGAGAAACAAATAAGCCTATTTTA
AAAATGGGGAACAGAGGTAAACAGAGAATTCTCAACTGAGGAAACTTGAA
TGGCCGAGAAACACCTAAAGAAATGTTCAACATCCTTAGTCATCAGGGAA
ATGCAAATCAAAATGACCCTGAGATTCCACCTCACACCAGTCATAATGGC
TAAGATCAAAAACTCACCCCGATAGCAGATGCTGGCGAGGATGTGGAGAA
AGAGGAACTCTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACT
CTGGAAGTCAGTCTGGCGGTTCCTCAGAGAATTGGATATAATACTACAGG
AGGATCCCACAATACCTCTCCGGGGCATATACTCAGAAGATGCTCCAACA
TGTAATAAGGACACATGCTCCACTATGTTCATAGCAGTCTTATTTATAAT
AGCCAGGGGCTGGAAACAACCCAGATATTCCTCAACAGAGAAATGGATAC
AGAAAATGTGACATTTACAC

Query= MSMg01no297_n09.b1 MSMg01no297_n09.b1 CHROMAT_FILE:
MSMg01no297_n09.b1 PHD_FILE: MSMg01no297_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:22 2005
         (677 letters)



>mm_chr2_123356739_123357815
          Length = 1077

 Score = 1237 bits (640), Expect = 0.0
 Identities = 664/672 (98%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcatacttctctcagcctgattaatgatgctataaagtttgtgtgactgctactca 65
           ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gaattcatacttcacagagcctgattaatgatgctataaagtttgtgtgactgctactca 818

                                                                       
Query: 66  tgaaactttggtctattcagtgtcatatagaaaacattttgtattggacactgtaatttt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tgaaactttggtctattcagtgtcatatagaaaacattttgtattggacactgtaatttt 758

                                                                       
Query: 126 gacctcagactggatgattgacatagagtttgtttcccacagagacatcagagtgccttg 185
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 757 gacctcagactggatgattgacatagagtttgtttcccacggagacatcagagtgccttg 698

                                                                       
Query: 186 agcttaagacatccccagagggtataagttgaaaagaaaattttaagcaactttattagg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 agcttaagacatccccagagggtataagttgaaaagaaaattttaagcaactttattagg 638

                                                                       
Query: 246 aacaaataagtatactcaaacactcagaagacaactaaatcacattttctttctctaact 305
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 637 aacaaataagtatactcaaacactcagaagacaactaaatcacatttcctttctctaact 578

                                                                       
Query: 306 gcaatcttggatgtttatgaagacatgaagtcattaaaaactgtgagaagggggttttga 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcaatcttggatgtttatgaagacatgaagtcattaaaaactgtgagaagggggttttga 518

                                                                       
Query: 366 ctaggatcacgccgacagttctcaccacacacagtagagtctggggaggtcaggattata 425
           ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctaggatcatggtgacagttctcaccacacacagtagagtctggggaggtcaggattata 458

                                                                       
Query: 426 ttcaattttattttcagtgctttggactttattgtgcataatgcaccctcttatattgac 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttcaattttattttcagtgctttggactttattgtgcataatgcaccctcttatattgac 398

                                                                       
Query: 486 tggttataaatctgtaattatatggctgtctagaaaattctcaaaaatttaaaaaattat 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tggttataaatctgtaattatatggctgtctagaaaattctcaaaaatttaaaaaattat 338

                                                                       
Query: 546 agagtttttcaacttgcaggaattttttttccagcctgtgcctcataggtgatgccacgt 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agagtttttcaacttgcaggaattttttttccagcctgtgcctcataggtgatgccacgt 278

                                                                       
Query: 606 aaatgatattgatcatgtctaccaaggtagcgaaatcatgccccttattcaagattcagt 665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaatgatattgatcatgtctaccaaggtagcgaaatcatgccccttattcaagattcagt 218

                       
Query: 666 caaatgctgctt 677
           ||||||||||||
Sbjct: 217 caaatgctgctt 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)