Query= MSMg01no299_d19.b1 MSMg01no299_d19.b1 CHROMAT_FILE:
MSMg01no299_d19.b1 PHD_FILE: MSMg01no299_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:06 2005
(320 letters)
>mm_chr2_115501660_115502379
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%)
Strand = Plus / Minus
Query: 5 gaattccagcaacagataatttgttcccatttccttaaagaaaactcacacaaccaatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattccagcaacagataatttgttcccatttccttaaagaaaactcacacaaccaatac 459
Query: 65 atttccatcaaataatccacccagaacagaatggaatatataggacccaccaaattcagt 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atttccatcaaataattcacccagaacagaatggaatatataggacccaccaaattcagt 399
Query: 125 atttaagtatttctgtacatttatgcaactggaaacagttatttgaccatatagtagcat 184
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 398 atttaagtattcctgtacatttatgcaactggaagcagttatttgaccatatagtagcat 339
Query: 185 tggtatttgtgacttgaagtgagtctagtcaaacacactcagttccagttatctgaggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tggtatttgtgacttgaagtgagtctagtcaaacacactcagttccagttatctgaggtt 279
Query: 245 ctagacttaagtttcggtcacatctaaactctgtgaacttctttcccattgaagtttgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctagacttaagtttcggtcacatctaaactctgtgaacttctttcccattgaagtttgct 219
Query: 305 agtcctcagggagg 318
||||||||||||||
Sbjct: 218 agtcctcagggagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_d19.g1 MSMg01no299_d19.g1 CHROMAT_FILE:
MSMg01no299_d19.g1 PHD_FILE: MSMg01no299_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:06 2005
(292 letters)
>mm_chr2_115353525_115354217
Length = 693
Score = 503 bits (260), Expect = e-147
Identities = 284/296 (95%), Gaps = 11/296 (3%)
Strand = Plus / Plus
Query: 1 catacaaaagaaaattcttccatgaaaagagaagagaaaaaaaaaa-cagttaatttctg 59
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 201 catacaaaagaaaattcttccatgaaaagagaaaagaaaaaaaaaaacagttaatttctg 260
Query: 60 gtgtaaggaaaaatgacattccaccctccaaaatgtgccaagctgagggaaaatgaaaca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtaaggaaaaatgacattccaccctccaaaatgtgccaagctgagggaaaatgaaaca 320
Query: 120 caacattctaaaggctgaagtgtaagaaaaccctctgt-tgtgaagacatccaaatctct 178
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 321 caacattctaaaggctgaagtgtaagaaaaccctctgtct-tgaagacatccaaatctct 379
Query: 179 ctcgtttgaactatttacaccatatgcgtcccaataaggctcctttctgattaaataatg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcgtttgaactatttacaccatatgcgtcccaataaggctcctttctgattaaataatg 439
Query: 239 acaagtaagtggaacctttta----gggcttcaaagacccttgaatctttacacag 290
|||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 440 acaagtaagtggaacc----aaagagggcttcaaagacccttgaatctttacacag 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
