Query= MSMg01no299_o14.b1 MSMg01no299_o14.b1 CHROMAT_FILE:
MSMg01no299_o14.b1 PHD_FILE: MSMg01no299_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:58 2005
(465 letters)
>mm_chr2_77478573_77479437
Length = 865
Score = 826 bits (427), Expect = 0.0
Identities = 454/463 (98%), Gaps = 2/463 (0%)
Strand = Plus / Plus
Query: 3 gaattccatgaactatatggcaataacaccaaggccaagaagccattgaatagatgcata 62
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattccatgaaccaaatggcaataacaccaaggccaagaagccattgaatagatgcata 262
Query: 63 cttagggagtaatatagactgaatgtaaaaaattaacttttagtataatgttacacttat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttagggagtaatatagactgaatgtaaaaaattaacttttagtataatgttacacttat 322
Query: 123 caaaataaaacacaacgataagaaaaacagcatgggctggaaagatggcagtcagtggtt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caaaataaaacacaacgataagaaaaacagcatgggctggaaagatggcagtcagtggtt 382
Query: 183 aaaaacactgactgctcttccagaggtcctgagttcaatccccaacaaacaggtggtggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 383 aaaaacactgactgctcttccagaggtcctgagttcaatccccaacaaacacgtggtggt 442
Query: 243 tcacaaccatctgtaatgggatctgatgccctcttctggtgtgtctgaagacagctacag 302
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcacaaccatctctaatgggatctgatgccctcttctggtgtgtctgaagacagctacag 502
Query: 303 tgtattaatataaaacaataaaataaacaaacaaataaatcgtttttaaaaaagaaagaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgtattaatataaaacaataaaataaacaaacaaataaatcgtttttaaaaaagaaagaa 562
Query: 363 aaacattgccgccgcatcagtatctattttaggacaaggaaatttaaatgaccagctgca 422
|||||||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaacattgt-gt-gtatcagtatctattttaggacaaggaaatttaaatgaccagctgca 620
Query: 423 gtcattaaatacacaggatcatgaacctgtgttagaaaggatg 465
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcattaaatacacaggatcatgaacctgtgttagaaaggatg 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_o14.g1 MSMg01no299_o14.g1 CHROMAT_FILE:
MSMg01no299_o14.g1 PHD_FILE: MSMg01no299_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:58 2005
(338 letters)
>mm_chr2_77631161_77631898
Length = 738
Score = 584 bits (302), Expect = e-171
Identities = 329/338 (97%)
Strand = Plus / Minus
Query: 1 tcttgatgcttcaaaatacgttgaagggagctagagagatagttcagcagttaagagctc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 726 tcttgatgcttcaaaatacgttgaagggagctagagagatagttcagcaggtaagagctc 667
Query: 61 tggctgctcttgcacggtgcctgaattccgctcccagtaccctcatggcagttaccagct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 666 tggctgctcttgcacggtgcctgaattccgttcccagtaccctcatggcagttaccagct 607
Query: 121 gcctgtaattccagccccaggttcctggatgccttcttctggcctccataggtatcaggg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gcctgtaattcccgccccaggttcctggatgccttcttctggcctccataggtatcaggg 547
Query: 181 gcacacaccagtttctgcttgtgtggataacttcagtcggatcttctgggtctgtactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gcacacaccagtttctgcttgtgtggataacttcagtcggatcttctgggtctgtactca 487
Query: 241 cttcttcctgttgtctgctgggctgagagttcagtccgcctcctaactctccttttctct 300
||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 486 cttcttcctgtcgtctgctgggctgagagttcagtccgccacctaactctcctaccctct 427
Query: 301 ccctccagtttagtcgtagttaacggtaaatttggcag 338
||||||||||||||||||||||| ||||||||||||||
Sbjct: 426 ccctccagtttagtcgtagttaaaggtaaatttggcag 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
