Query= MSMg01no302_b13.b1 MSMg01no302_b13.b1 CHROMAT_FILE:
MSMg01no302_b13.b1 PHD_FILE: MSMg01no302_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:39 2005
(318 letters)
>mm_chr2_10068794_10069509
Length = 716
Score = 572 bits (296), Expect = e-168
Identities = 309/314 (98%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcacttggaatagcacagaggagttttcaaacacaaatggaataagacacgca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 515 ggaattctcacttggaatagcacagaggagttttcaaacacaaatggaataagacacaca 456
Query: 64 ttctctctcccctgcaacctgtacctgacgcccacctggtattttctgcgatgctaaagc 123
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 455 ttctctctcccctgcaacctgtacctgacgcccacctggtattttctgtgatgctaaagc 396
Query: 124 cagaagacagagaacccagcagcacctgaaggcaatccccacagagtgttttcaacctaa 183
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 395 cagaagacagagaacccagcagcacctgaaggcaatcccca--gagtgttttcaacctaa 338
Query: 184 agggctgccagatgtgtcttagccagatgttgggagagctccagagaatgtacctgccaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agggctgccagatgtgtcttagccagatgttgggagagctccagagaatgtacctgccaa 278
Query: 244 cacaaatgtgtctgtcgaaggcttctggctcccacagagtgtgggttttgtgggtggtgc 303
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cacaaacgtgtctgtcgaaggcttctggctcccacagagtgtgggttttgtgggtggtgc 218
Query: 304 tgagagacgtatca 317
||||||||||||||
Sbjct: 217 tgagagacgtatca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_b13.g1 MSMg01no302_b13.g1 CHROMAT_FILE:
MSMg01no302_b13.g1 PHD_FILE: MSMg01no302_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:39 2005
(518 letters)
>mm_chr2_9906250_9907167
Length = 918
Score = 965 bits (499), Expect = 0.0
Identities = 514/519 (99%), Gaps = 2/519 (0%)
Strand = Plus / Plus
Query: 1 tctatttgaaaagcatagcctgtgtactggcctatcttcctcaaaaaaaattaggaaaaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 tctatttgaaaagcatagcctgtgtactggcctatcttcctc-aaaaaaattaggaaaaa 259
Query: 61 aaagaaaaaatatatacatatatatattcataacagattcaataattgcagtgaacttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaagaaaaaatatatacatatatatattcataacagattcaataattgcagtgaacttcc 319
Query: 121 aacattgaaaacattaaaatgcaaacattttgaagtcaaatcccttctcatttatccctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacattgaaaacattaaaatgcaaacattttgaagtcaaatcccttctcatttatccctt 379
Query: 181 ttgtgtatgtgatgttgtatgctgtatgtgatgaatacatgtgaac-tgtgaacatgcgt 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 380 ttgtgtatgtgatgttgtatgctgtatgtgatgaatacatgtgaacgtgtgaacatgcgt 439
Query: 240 gcccatgtgtactcacatgcgagtcatggtaagtggtgagcctgaagacacgaggccagc 299
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 gcccatgtgtacacacatgcgagtcatggtaagtggtgagcctgaagacaggaggccagc 499
Query: 300 cactcttctcttatttctttttctttctggttttctgagacagggtttctctgtgtaacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cactcttctcttatttctttttctttctggttttctgagacagggtttctctgtgtaacc 559
Query: 360 ctgaatgtcctagacttgcttgtagaccaggctggccttgaattcacagagatccacctg 419
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 ctgaatgtcctagacttgcttgtagaccaggctggccttgaactcacagagatccacctg 619
Query: 420 cttcagcctcccaagtgctgggattaaaggcatgggccatcagcctggctcttcaactgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cttcagcctcccaagtgctgggattaaaggcatgggccatcagcctggctcttcaactgc 679
Query: 480 atttttagcatgaacctcagatgcaacatgaaactccca 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atttttagcatgaacctcagatgcaacatgaaactccca 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
