Query= MSMg01no302_c08.b1 MSMg01no302_c08.b1 CHROMAT_FILE:
MSMg01no302_c08.b1 PHD_FILE: MSMg01no302_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:43 2005
(320 letters)
>mm_chr2_39064601_39065320
Length = 720
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%)
Strand = Plus / Minus
Query: 5 gaattccaaagcactgactagagattaactttgacattagattctgttagtgttccacct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaattccaaagcactgactagagattaactttgacattagattctgttagtgttccacct 401
Query: 65 ctcttctaactttaccccactttgtagaagttcatcactgggtatgctgtgtatataaat 124
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctcttctaacattacctgactttgtagaagttcatcactgggtatgctgtgtatataaat 341
Query: 125 tgtaattgggactgcaggacctggaatatgttaggaactgtcactctaccactcagctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtaattgggactgcaggacctggaatatgttaggaactgtcactctaccactcagctga 281
Query: 185 ctatctgcagtgtctcttcctaatgtgatagtgtaaagggggaaacgtgtttagtttgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ctatctgcagtgtctcttcctaatgtgatagtgtaaagggggaaacgtgtttagtttgtc 221
Query: 245 cctgaatagaggctgctttataaattaaataataataatttagctacctacaaagctatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cctgaatagaggctgctttataaattaaataataataatttagctacctacaaagctatt 161
Query: 305 tcctttttgctttttc 320
||||||||||||||||
Sbjct: 160 tcctttttgctttttc 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_c08.g1 MSMg01no302_c08.g1 CHROMAT_FILE:
MSMg01no302_c08.g1 PHD_FILE: MSMg01no302_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:43 2005
(294 letters)
>mm_chr2_38902056_38902745
Length = 690
Score = 534 bits (276), Expect = e-156
Identities = 285/290 (98%), Gaps = 4/290 (1%)
Strand = Plus / Plus
Query: 1 aggatactgttgtcttttctcccttcacctcttccacttccttaaaaaaataaaagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggatactgttgtcttttctcccttcacctcttccacttccttaaaaaaataaaagaaaa 260
Query: 61 aagaaatggatgtcttaaactgttttcaaaaccaatctcaaatgcctaagcctgtcttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaaatggatgtcttaaactgttttcaaaaccaatctcaaatgcctaagcctgtcttag 320
Query: 121 cttctcaagtccctagactataggtatgtaccaccacatctggaaataccatgtcttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctcaagtccctagactataggtatgtaccaccacatctggaaataccatgtcttctg 380
Query: 181 ttcagctacctgggaagctgagtagctctctacatgagtacaatttggctagaacaggaa 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ttcagctacctgggaagctgagtagctctct----gagtacaatttggctagaacaggaa 436
Query: 241 gtagacctgtgggactcaggaggaagtccctgtccttgtccttgatttta 290
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 437 gtagacctgtgggactcaggaggaagtccctgtccttgtccctgatttta 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 690
Length adjustment: 9
Effective length of query: 285
Effective length of database: 681
Effective search space: 194085
Effective search space used: 194085
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
