XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAG
TTCTACTTTCCCTTACATGAATAATACTTCAGTTTCTCCTAAAACCGCAA
CCCACCTCCTTCCTAGGCCACTTGTAAATTCCTGTGTATGGGAGTGACTA
GACTGTTGTTCTAAGTATTTACTATGTAGACTAGCCCTGAGATTACTAGT
TCTATTCAAGTAAATTGTAATGCCTGTTTTCTTTCACTGTCTCCCTTATA
ATGCTACAGGTAATTCTGAATGCTACTGAATAGGTTATATTCTTACTGAA
TTCCAAGCCCAGGGTCTGCTCAAGGACTGCCTAGGACATTGGAACACTGG
TGGAGGTTAATCTAACTTAGCTATATGTCAAAATCAATCCTTAGAGGCAC
TTATAATAAAACAATATTGAGGGAAAGCACACAGATCCGTTCACCCAATT
AATGTGGGGACAGGTTTGGAGGATGTGTGCTGTGGGAATGCCAAGGTTCC
AGGAGACTAAGTTTCCATGAACTTTTTGCCTCAGGACTGCTTCCATGTTT
CTAGGCCTGTCATGTGAGTCACTACTGGATGTAGCAACCACCCATAATGC
CCAGGGTCTTACCTCAGAATCACTAATTAAGAAAATGCCCTATCCCCCAA
TGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTA
TAGGTGGAACAACAATATGAACTAACCAGTACCCCGGAGCTCTTGACTCT
AGCTGCATATGTATCACAAGG

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATCCCATATACAGTCATCAAACCCAGACACTA
TTATGGATGCCAATAAGTGCATGCTGATAGGAGCCTGATATAAGCTGTCT
CCTGAGAGGCTCTGCCAGAGCCTGACAGAGAAGTCTTCTCTTAATCAGTT
GTAATAATCATTTAATTTCTGTCCTTAAGGCTATTTATGTGGGGATTATA
CTTATCAACTTGTATATGCTAAACCAACCTGAGGACTCTGGAATCAGATA
AACTTGTTCATATCATATTTTAGTTAAAACATTAAATATAATAAGCAAAT
AAAGTATTTTGATTGCTGAGAGAAATATCACATACAAAAGCAAGGCCATT
ATAATAACTGGTTTCTCAGCATTAACTTTAAATACTTGAAGGGATTAGAA
TGATATGCCATCCCTGACTGCTACATCCAGAAAAACTGTCACAATTAAAG
AAAGGAACACTTTGCATAAAAAAGCAGGCTAAAGGAATTCATGACTGAGC
CAATTCTACAAAAGATTCTTGAAAAAAATTTTTTGATCTGACAATAAAAA
TAAATATATCCATAAGGCTATAGGAAAAAAATAAACTGTGATAGAACAGT
AGTTAAGAAAATGAAGAATCAGAAACTACCAACCACTGTAAAATTGTAAT
GATAGGAATTAATATATACTTTTCAATAGCAATTCTAAAAATTTATATAT
GTCAGTTTATTTATATATATACAT

Query= MSMg01no302_p22.g1 MSMg01no302_p22.g1 CHROMAT_FILE:
MSMg01no302_p22.g1 PHD_FILE: MSMg01no302_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:46 2005
         (585 letters)



>mm_chr2_140182936_140183918
          Length = 983

 Score =  808 bits (418), Expect = 0.0
 Identities = 443/452 (98%), Gaps = 2/452 (0%)
 Strand = Plus / Minus

                                                                       
Query: 134 tcaacttgtatatgctaaaccaacctgaggactctggaatcagataaacttgttcatatc 193
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 983 tcaacttgtatatgctaaaccaacctgaggactctggaatcagataaacttgctcatatc 924

                                                                       
Query: 194 atattttagttaaaacattaaatataataagcaaataaagtattttgattgctgagagaa 253
           | ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 923 acattttagttaaaacattaaatataataagcaaataaagtattttgaaagctgagagaa 864

                                                                       
Query: 254 atatcacatacaaaagcaaggccattataataactggtttctcagcattaactttaaata 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 atatcacatacaaaagcaaggccattataataactggtttctcagcattaactttaaata 804

                                                                       
Query: 314 cttgaagggattagaatgatatgccatccctgactgctacatccagaaaaactgtcacaa 373
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 cttgaagggtttagaatgatatgccatccctgactgctacatccagaaaaactgtcacaa 744

                                                                       
Query: 374 ttaaagaaaggaacactttgcataaaaaagcaggctaaaggaattcatgactgagccaat 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttaaagaaaggaacactttgcataaaaaagcaggctaaaggaattcatgactgagccaat 684

                                                                       
Query: 434 tctacaaaagattcttgaaaaaaattttttgatctgacaataaaaataaatatatccata 493
           |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||
Sbjct: 683 tctacaaaagattcttgaaaaaaaattt--gatctgacaataaaaataaatatatccata 626

                                                                       
Query: 494 aggctataggaaaaaaataaactgtgatagaacagtagttaagaaaatgaagaatcagaa 553
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 625 aggctataggaaaaaaataaactgtgatagaacagtagttaagaaaacgaagaatcagaa 566

                                           
Query: 554 actaccaaccactgtaaaattgtaatgatagg 585
           ||||||||||||||||||||||||||||||||
Sbjct: 565 actaccaaccactgtaaaattgtaatgatagg 534


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 983
Length adjustment: 10
Effective length of query: 575
Effective length of database: 973
Effective search space:   559475
Effective search space used:   559475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)