Query= MSMg01no305_a07.b1 MSMg01no305_a07.b1 CHROMAT_FILE:
MSMg01no305_a07.b1 PHD_FILE: MSMg01no305_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:25 2005
(420 letters)
>mm_chr2_38161894_38162714
Length = 821
Score = 741 bits (383), Expect = 0.0
Identities = 401/407 (98%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 15 gaattca-ggcttgggatacatgagaacctgtctcaaaatataaataaatgcagaaaata 73
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattcaaggcttgggatacatgagaacctgtctcaaaatataaataaatgcagaaaata 274
Query: 74 gtgattgtatcttagtgataggtctcaatctcattggacacctgtgttacactcaaggca 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtgattgtatcttagtgataggtctcaatctcattggacacctgtgttacactcaaggca 334
Query: 134 ggatattgtcctgaaattgatgagacctcaggatgtccagagatagtcagaccctgttct 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggatattgtcctgaaattgatgagacctcaggatgtccagagatagtcagaccctgttct 394
Query: 194 tcttaggaagttggtatggctcattcattatacaaatatttatttaaaagttcttgtgtg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tcttaggaagttggtatggctcattcattatacaaatatttatttaaaagttcttgtgtg 454
Query: 254 taagcatagaattatcatatgacccagtaattttgtacatatacatgtatcccccagata 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 taagcatagaattatcatatgacccagtaattttgtacatatacatgtatcccccagata 514
Query: 314 gttggaaacaggaatccaaacaatcacttacatacaaatgttcttatcagcaattttctt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 515 gttggaaacaggaatccaaacaatcacttacatacaaatgttcttatcagcaacactcat 574
Query: 374 agtatccaaaatatggaaacattcccattagctgatgtgcatatata 420
|| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agaatccaaaatatggaaacattcccattagctgatgtgcatatata 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 821
Length adjustment: 9
Effective length of query: 411
Effective length of database: 812
Effective search space: 333732
Effective search space used: 333732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_a07.g1 MSMg01no305_a07.g1 CHROMAT_FILE:
MSMg01no305_a07.g1 PHD_FILE: MSMg01no305_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:26 2005
(384 letters)
>mm_chr2_38356566_38357349
Length = 784
Score = 696 bits (360), Expect = 0.0
Identities = 374/384 (97%), Gaps = 10/384 (2%)
Strand = Plus / Minus
Query: 1 tgcatggagaggtttgggaggcaggacatcttaatagcaagaaagagatggttggtttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tgcatggagaggtttgggaggcaggacatcttaatagcaagaaagagatggttggtttag 520
Query: 61 gtgtccaggaacaatagtggatcgggtcccagaacaagaactctctctcattggtcaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtgtccaggaacaatagtggatcgggtcccagaacaagaactctctctcattggtcaagg 460
Query: 121 acccagacaccgactgagcctattaacttctaggctaaaagccttttgacttgggagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acccagacaccgactgagcctattaacttctaggctaaaagccttttgacttgggagttt 400
Query: 181 taatgaagcccttctggtagcctgcaaaacccaggctcagcaggatgttccaaagtagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 taatgaagcccttctggtagcctgcaaaacccaggctcagcaggatgttccaaagtagga 340
Query: 241 acaacacaagaagagccatgggtcctacaaagtcaccccaccccagtgcagaccctagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 acaacacaagaagagccatgggtcctacaaagtcaccccaccccagtgcagaccctagct 280
Query: 301 accacaaagtcatacctgggagagagagtttttt-----agagccagccagcatatttca 355
|||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 279 accacaaagtcatacctgggagagagag-----tagacaagagccagccagcatatttca 225
Query: 356 cagaaggcttccaaaagcaggcta 379
||||||||||||||||||||||||
Sbjct: 224 cagaaggcttccaaaagcaggcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
