Query= MSMg01no306_d23.b1 MSMg01no306_d23.b1 CHROMAT_FILE:
MSMg01no306_d23.b1 PHD_FILE: MSMg01no306_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:58 2005
(320 letters)
>mm_chr2_32287647_32288364
Length = 718
Score = 526 bits (272), Expect = e-154
Identities = 303/316 (95%), Gaps = 6/316 (1%)
Strand = Plus / Plus
Query: 5 gaattccataaatgtatcccaagaaatatctactcacccccccac--acttccctcatat 62
||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct: 205 gaattccataaatgtatccaaagaaatatctactcacccccccccccacttccctcatat 264
Query: 63 ccccctcaacacgtttatcctttatttatttatttgtgataacccactaactccagttag 122
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 ccccctcaacacgcccatcctttatttattt----gtgataacccactaactccagttag 320
Query: 123 tgtggtccacaggtccacaggtctagagaaacctataaagagagtgggcctcccttctta 182
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tgtggtccacaggtccacaggtctagagaaacctataaagagagtgggcctctcttctta 380
Query: 183 gcagctatccactgccaatagtgcctcagtgtggggtggggcccggagacaatctatacc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagctatccactgccaatagtgcctcagtgtggggtggggcccggagacaatctatacc 440
Query: 243 aggattctggctggcttgagcaagtcaccttggctgctgtgatattgtgatcctcatagc 302
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 aggattctggctggcttgagcaagtcaccttggctgctgtgagattgtgatcctcatagc 500
Query: 303 cagcatgtgcagaagg 318
||||||||||||||||
Sbjct: 501 cagcatgtgcagaagg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_d23.g1 MSMg01no306_d23.g1 CHROMAT_FILE:
MSMg01no306_d23.g1 PHD_FILE: MSMg01no306_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:58 2005
(313 letters)
>mm_chr2_32464683_32465395
Length = 713
Score = 435 bits (225), Expect = e-126
Identities = 272/313 (86%), Gaps = 40/313 (12%)
Strand = Plus / Minus
Query: 1 cacagagaaaccctgtcttgaaaaaaacaaaacaaaacaaaaaagcccaacaaaacaaca 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cacagagaaaccctgtctcgaaaaaaacaaaacaaaacaaaaaagcccaacaaaacaaca 542
Query: 61 acaacaacggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa 120
|||||||||||||||||||| ||
Sbjct: 541 acaacaacggaaggaaggaa-------------------------------------ga- 520
Query: 121 ggaagaaaacaggaacaaatacatgatggggattcaggtactctgattttgaacatggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 --aagaaaacaggaacaaatacatgatggggattcaggtactctgattttgaacatggcc 462
Query: 181 attcccccaaggcccctgttcacttccccatccctatcctgcacggcactccccagaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 attcccccaaggcccctgttcacttccccatccctatcctgcacggcactccccagaacc 402
Query: 241 attcacagtcaatgctttcccactgatacataagccaagcttttggatatcaaagaggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 attcacagtcaatgctttcccactgatacataagccaagcttttggatatcaaagaggac 342
Query: 301 cttgggcccagag 313
|||||||||||||
Sbjct: 341 cttgggcccagag 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
