MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-306E15
Chromosome	2 (Build37)
Map Location	72,564,425 - 72,565,106
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gm1631, Itga6, Pdk1, Rapgef4, LOC100040270, B230120H23Rik, Cdca7, LOC383712, LOC635960, LOC100039928
Downstream gene	6430710C18Rik, Sp3, Hspe1-ps5, Gtpbp9, LOC620110, Sp9, 1700023B02Rik, Scrn3, Gpr155, Wipf1, Chrna1, Chn1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm1631 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381371 MGI:2686477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itga6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16403 MGI:96605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228026 MGI:1926119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rapgef4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56508 MGI:1917723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040270 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	B230120H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65964 MGI:2443258
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cdca7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66953 MGI:1914203
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383712 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC635960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:635960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 20 Proteins

name	LOC100039928 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039928
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	6430710C18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76218 MGI:1923468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Sp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20687 MGI:1277166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspe1-ps5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93752 MGI:1935166
definition	gene_synonym : Cpn10-rs6 note : heat shock protein 1 (chaperonin 10), pseudogene 5 pseudo : _no_value

name	Gtpbp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67059 MGI:1914309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC620110 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 152 ESTs, 12 Proteins pseudo : _no_value

name	Sp9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381373 MGI:3574660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700023B02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66935 MGI:1914185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scrn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74616 MGI:1921866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr155 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68526 MGI:1915776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wipf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215280 MGI:2178801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrna1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11435 MGI:87885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gm1631 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41235763 GeneID:381371 MGI:2686477
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1631, (NCBI) transcript_id : NM_201366.1

name	Itga6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352784 GeneID:16403 MGI:96605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha 6 transcript_id : NM_008397.3

name	Pdk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377025 GeneID:228026 MGI:1926119
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyruvate dehydrogenase kinase, isoenzyme 1 transcript_id : NM_172665.3

name	Rapgef4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9790086 GeneID:56508 MGI:1917723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rap guanine nucleotide exchange factor (GEF) 4 transcript_id : NM_019688.1

name	LOC100040270 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249832 GeneID:100040270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to pORF2 transcript_id : XM_001474603.1

name	B230120H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802597 GeneID:65964 MGI:2443258
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230120H23 gene transcript_id : NM_178084.3

name	B230120H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375401 GeneID:65964 MGI:2443258
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230120H23 gene transcript_id : NM_023057.2

name	Cdca7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352638 GeneID:66953 MGI:1914203
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle associated 7 transcript_id : NM_025866.2

name	LOC383712 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367032 GeneID:383712
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : similar to putative translation initiation factor A121/Sui1 transcript_id : XM_357202.5

name	LOC635960 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249834 GeneID:635960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 20 Proteins product : similar to adenylate kinase 4 transcript_id : XM_001474672.1

name	6430710C18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249838 GeneID:76218 MGI:1923468
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 6430710C18 gene transcript_id : XM_001474689.1

name	Sp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124001546 GeneID:20687 MGI:1277166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 3 transcript_id : NM_001018042.2

name	Gtpbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677912 GeneID:67059 MGI:1914309
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP-binding protein 9 (putative) transcript_id : NM_025942.2

name	Gtpbp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677914 GeneID:67059 MGI:1914309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP-binding protein 9 (putative) transcript_id : NM_030091.1

name	Sp9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52693932 GeneID:381373 MGI:3574660
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 9 transcript_id : NM_001005343.1

name	1700023B02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350084 GeneID:66935 MGI:1914185
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700023B02 gene transcript_id : NM_025854.2

name	Scrn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61969659 GeneID:74616 MGI:1921866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secernin 3 transcript_id : NM_029022.1

name	Gpr155 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123959715 GeneID:68526 MGI:1915776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 155 transcript_id : NM_001080707.1

name	Wipf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130115 GeneID:215280 MGI:2178801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WAS/WASL interacting protein family, member 1 transcript_id : NM_153138.3

name	Chrna1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802554 GeneID:11435 MGI:87885
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) transcript_id : NM_007389.3

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371256 GeneID:108699 MGI:1915674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_175752.2

name	Chn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130637 GeneID:108699 MGI:1915674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chimerin (chimaerin) 1 transcript_id : NM_029716.2

name	Gm1631 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41235764 GeneID:381371 MGI:2686477
definition	codon_start : 1 product : hypothetical protein LOC381371 protein_id : NP_958754.1

name	Itga6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982236 CCDS:CCDS16118.1 GeneID:16403 MGI:96605
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0008305 - integrin complex [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007160 - cell-matrix adhesion [Evidence IMP]; GO:0046847 - filopodium formation [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0050900 - leukocyte migration [Evidence IMP] [Evidence IGI]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP] codon_start : 1 product : integrin alpha 6 protein_id : NP_032423.2

name	Pdk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625975 CCDS:CCDS16119.1 GeneID:228026 MGI:1926119
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : pyruvate dehydrogenase kinase, isoenzyme 1 protein_id : NP_766253.2

name	Rapgef4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790087 CCDS:CCDS16120.1 GeneID:56508 MGI:1917723
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0030552 - cAMP binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0017156 - calcium ion-dependent exocytosis [Evidence IDA]; GO:0019933 - cAMP-mediated signaling [Evidence IDA]; GO:0006887 - exocytosis [Evidence IEA]; GO:0030073 - insulin secretion [Evidence IDA]; GO:0017157 - regulation of exocytosis [Evidence IDA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : cAMP-dependent Rap1 guanine-nucleotide exchange factor; cAMP-GEFII product : cAMP-regulated guanine nucleotide exchange factor II protein_id : NP_062662.1

name	LOC100040270 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249833 GeneID:100040270
definition	codon_start : 1 product : similar to pORF2 protein_id : XP_001474653.1

name	B230120H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12746436 GeneID:65964 MGI:2443258
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IDA] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IDA] [Evidence IEA]; GO:0004709 - MAP kinase kinase kinase activity [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000075 - cell cycle checkpoint [Evidence ISS]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IDA]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; MLK-like mitogen-activated protein triple kinase; sterile-alpha motif and leucine zipper containing kinase AZK product : leucine zipper- and sterile alpha motif-containing kinase isoform 1 protein_id : NP_075544.1

name	B230120H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017393 GeneID:65964 MGI:2443258
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IDA] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IDA] [Evidence IEA]; GO:0004709 - MAP kinase kinase kinase activity [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000075 - cell cycle checkpoint [Evidence ISS]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IDA]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; MLK-like mitogen-activated protein triple kinase; sterile-alpha motif and leucine zipper containing kinase AZK product : leucine zipper- and sterile alpha motif-containing kinase isoform 2 protein_id : NP_835185.1

name	Cdca7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313220 CCDS:CCDS16121.1 GeneID:66953 MGI:1914203
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0042127 - regulation of cell proliferation [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : cell division cycle associated 7 protein_id : NP_080142.1

name	LOC383712 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:63487010 GeneID:383712
definition	codon_start : 1 product : similar to putative translation initiation factor A121/Sui1 protein_id : XP_357202.3

name	LOC635960 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249835 GeneID:635960
definition	codon_start : 1 product : similar to adenylate kinase 4 protein_id : XP_001474722.1

name	6430710C18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249839 GeneID:76218 MGI:1923468
definition	codon_start : 1 product : hypothetical protein LOC76218 protein_id : XP_001474739.1

name	Sp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301157 CCDS:CCDS16122.1 GeneID:20687 MGI:1277166
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA] [Evidence ISS]; GO:0003690 - double-stranded DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0030218 - erythrocyte differentiation [Evidence IMP]; GO:0030851 - granulocyte differentiation [Evidence IMP]; GO:0030224 - monocyte differentiation [Evidence IMP]; GO:0001779 - natural killer cell differentiation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0030217 - T cell differentiation [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : trans-acting transcription factor 3 isoform 1 protein_id : NP_001018052.1

name	Gtpbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313144 CCDS:CCDS16124.1 GeneID:67059 MGI:1914309
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; GTP-binding protein PTD004 product : GTP-binding protein PTD004 isoform a protein_id : NP_080218.1

name	Gtpbp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76677915 CCDS:CCDS16125.1 GeneID:67059 MGI:1914309
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; GTP-binding protein PTD004 product : GTP-binding protein PTD004 isoform b protein_id : NP_084367.1

name	Sp9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52693933 CCDS:CCDS16126.1 GeneID:381373 MGI:3574660
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : buttonhead-like zinc finger transcription factor Sp9 product : trans-acting transcription factor 9 protein_id : NP_001005343.1

name	1700023B02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385336 CCDS:CCDS16127.1 GeneID:66935 MGI:1914185
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0042826 - histone deacetylase binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CBF1 interacting corepressor protein_id : NP_080130.1

name	Scrn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61969660 CCDS:CCDS16128.1 GeneID:74616 MGI:1921866
definition	GO_function : GO:0016805 - dipeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : secernin 3 protein_id : NP_083298.1

name	Gpr155 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123959716 GeneID:68526 MGI:1915776
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 155 protein_id : NP_001074176.1

name	Wipf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346579 CCDS:CCDS16131.1 GeneID:215280 MGI:2178801
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA] GO_process : GO:0030048 - actin filament-based movement [Evidence IDA] codon_start : 1 note : WASP interacting protein product : Wiskott-Aldrich syndrome protein interacting protein protein_id : NP_694778.1

name	Chrna1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542391 CCDS:CCDS16132.1 GeneID:11435 MGI:87885
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : acetylcholine receptor alpha; cholinergic receptor nicotinic alpha polypeptide 1 (muscle) product : cholinergic receptor, nicotinic, alpha 1 (muscle) protein_id : NP_031415.2

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461137 CCDS:CCDS16133.1 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1; chimaerin product : chimerin (chimaerin) 1 isoform 1 protein_id : NP_786928.1

name	Chn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386436 GeneID:108699 MGI:1915674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; chimaerin product : chimerin (chimaerin) 1 isoform 2 protein_id : NP_083992.1

name	LOC100039928 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039928
definition	number : 2 pseudo : _no_value

name	LOC100039928 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039928
definition	number : 1 pseudo : _no_value

name	LOC620110 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249840 GeneID:620110
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 152 ESTs, 12 Proteins product : similar to 60S ribosomal protein L7a (Surfeit locus protein 3) pseudo : _no_value transcript_id : XR_031929.1

clone name	MSMg01-476B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367L14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-359D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-451J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169A20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261O24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149G24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512P08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-306E15.T7 (MSMg01no306_e15.b1)	MSMg01-306E15.TJ (MSMg01no306_e15.g1)
ACC	AG430997	AG430998
length	761	752
length of high quality (start - end)	686 (46 - 731)	59 (259 - 317)
definition	CHROMAT_FILE: MSMg01no306_e15.b1 PHD_FILE: MSMg01no306_e15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:47:01 2005	CHROMAT_FILE: MSMg01no306_e15.g1 PHD_FILE: MSMg01no306_e15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:47:02 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCTGGCGCACATACCTCCTCATCCTTTCCTGAGTGGACAGGGAAGAC GAATGCCATTCGAGAGTGGCTTCCATGCACTTCTCTGACATAACCCACTG TCTCCTCTTAGTCATCTGTGAGGCAAACTTAACCCTCAGGAGTGCAGAAC CGATGCACACAGCCAGAGGGTTAGCAAGCCTGAGCACTTGGTGGTATGCC CAGACCTGAGGACTGTGCACAGTTCTGATTGCTTTTCTGTTGTTCACAAG TTGATTTAACACTCCGTCAAAGTGTCCTTTTCTCCTGTGCCCATTTTCCA TGGGAGAGAACTGAGGAAGACAGAGGTTAAGAGACGTGGCCTAAGATTTG AACCTTGGGAACCTCAGCTGGTTTCAGAGCCTGAGTGTGTCTTGCTGTTG TTGTTGTAATTTTAATTTCCTTCACCAAAAACCATCCGGCATGGAAGTCA ATTTGAAAGGAGTCCCACTAACAAAAACGGAAAAAGAAAAATCTATCATC GAAGAAATTACATCACAGCCAGGTATGGTGTGTGCAGCTCAGACCTGTAA TCCTAACACTCAAGAAGCTGAGGCAGGAGGATTGTCAAGAGTGCAAAACC AGCCTGAGTTATAAAACATGGCAAATTCCAGGCTTCTGCATCAAAGCCAA TGATAGTAAAGTATTATAAATCCCTGAATGGAGCTGAGNTCTATCATCCC ATTTGAGAGGA	CGATGCAGTGGGAGGCCTGGNGGCCGCCTGGCCTGCGGCACCCGCNGAAC NANAGAAGGATTTGCAGNAAGCAGGAAGNCAGGCNAAGNGGGCAANCNAA GNAGGAANACAGAAGATTTTGCCGCCGAGAGNGAGGNACCAGCCCNGANG ANAAGGGACCGGCNGAACCGGNAAGCCAGCCCNAANNAAAGGNNGNCCNN ANAAGAGNNGCCNNGAACCAACAGAAGGGGAAAAGAACTTNACCAANCCT ACTTCTGATAGAGGGCTAATATCCAATATATACAAAGAACTTAAGAAGTT AGACTCCAGAGAAACAAATTTTTTGTTTAAAAAGGGGGCACAAAGCCAAA CAAAGAATTCTCTTTTTTTTTCCACCCCCCCCCCGCAAAGTACCTAAAAA AATGTTCTACATCCTTTGTCATCAGGGAAATGAAAATCAAAACAATCCTG AGATTCCACCTCACACCAGTCAGAATGGTTAAGACCAAAAACTCAGGTGA CAGCAGATGCTGGCAAGGATGTAGAGAAAGAGGAGCACTCCTCCATTGTT GGTGGGATTGCAAGCTGGTACAACTACTCTGGAAATCAGTTTGGCAGTTC TTCAGAAAATTGGACATAGGACGATCCAAGGACCCAGAAATACCACTCCT GGGCTTATTCTCTTATGATGCTCCAACATGTAATAAGGATACCTGCTCCA CTATGCTCCATAGAGCCTTTATTATTATAACCAGAAGGCGGAAAGAACCT AG
quality values	Open. Hide. 8 10 8 8 8 14 16 35 59 34 39 39 39 37 39 37 37 37 37 37 41 37 39 43 48 30 29 31 31 30 29 27 23 9 7 7 8 7 7 10 10 10 12 22 22 28 37 41 47 36 36 36 36 36 36 53 53 50 44 34 25 22 16 15 15 11 11 12 24 24 34 34 37 37 37 41 50 53 53 57 57 57 57 57 57 57 57 57 57 57 57 57 47 47 53 53 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 57 57 57 44 48 43 43 43 39 43 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 50 59 43 43 47 47 48 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 50 48 43 43 46 46 54 54 54 54 54 68 57 57 59 59 59 59 59 59 57 57 59 59 57 57 59 59 59 53 53 50 50 50 50 47 47 59 59 44 41 41 44 44 44 47 44 44 44 41 41 44 59 59 59 59 59 59 48 48 48 53 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 50 50 50 59 59 59 59 59 59 59 44 37 37 44 44 44 59 47 50 50 50 50 50 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 53 53 57 68 68 68 68 59 57 57 57 57 57 57 59 59 59 59 59 50 50 50 50 50 47 59 59 59 59 59 47 47 47 59 43 35 35 37 37 37 37 41 41 41 48 59 59 48 48 48 48 48 48 57 59 57 57 57 48 57 57 59 57 57 57 54 54 48 59 59 47 32 32 28 37 37 43 47 48 48 59 59 59 59 48 48 48 48 41 41 41 47 43 43 43 37 37 41 39 30 34 24 24 24 34 41 41 41 39 30 30 25 20 20 25 37 41 37 37 43 43 37 37 30 30 30 30 32 41 36 31 37 37 34 31 39 39 35 30 25 25 32 33 36 36 37 39 41 41 39 31 31 39 31 31 28 28 31 39 37 41 31 36 43 41 41 43 59 35 31 28 15 9 9 9 9 16 12 26 29 25 32 37 37 34 32 25 25 25 30 31 30 30 24 32 32 35 35 31 32 41 41 37 35 41 41 35 31 25 24 19 20 23 19 22 12 18 11 3 0 3 23 23 28 33 28 28 22 18 20 12 15 12 20 11 11 9 9 8 8 8 8	Open. Hide. 8 8 8 8 10 10 9 9 23 12 10 10 10 12 22 34 36 23 22 3 0 3 27 27 44 47 47 30 27 12 9 3 3 7 7 7 3 6 9 9 6 6 6 6 3 0 3 12 12 3 0 3 0 3 27 27 27 9 9 9 9 15 9 9 10 6 3 0 3 6 6 6 6 6 6 6 8 3 0 3 23 23 23 3 0 3 22 3 0 3 21 14 7 7 3 0 3 0 3 7 3 0 3 27 27 27 3 0 3 21 21 33 28 29 20 20 32 25 24 18 7 7 6 6 6 7 15 19 21 25 3 0 3 7 7 3 0 3 25 25 39 19 7 7 3 0 3 3 0 3 3 0 3 7 7 9 9 19 39 39 27 25 3 0 3 23 19 18 7 7 3 0 3 27 27 41 41 47 47 25 29 3 0 3 3 0 0 3 14 7 7 3 0 0 3 0 3 3 0 0 3 0 3 27 27 27 3 0 0 3 27 3 0 0 3 25 25 39 47 47 59 59 19 9 9 9 9 9 9 19 44 43 43 19 9 9 9 7 7 3 0 3 25 25 27 3 0 3 29 18 11 9 9 9 9 11 18 12 16 24 25 47 59 59 59 59 59 59 59 48 48 57 57 57 57 57 57 59 59 59 59 59 59 59 48 48 48 54 57 57 57 57 59 57 59 59 47 43 48 48 48 48 48 59 57 57 48 48 48 48 46 46 40 23 23 11 9 9 9 10 15 16 8 3 3 3 11 11 9 9 9 25 12 11 11 23 23 15 11 11 23 24 47 25 24 9 9 9 23 23 41 47 47 44 30 19 9 9 7 7 6 10 10 17 17 22 31 19 11 10 8 10 10 10 11 14 14 18 16 12 10 8 8 8 8 6 9 12 30 31 59 47 47 47 48 48 48 59 59 57 57 57 53 50 48 48 48 48 48 48 48 53 53 59 57 43 43 37 31 28 28 28 32 28 26 14 14 12 25 12 12 12 12 18 23 13 13 13 13 28 30 41 41 39 43 37 39 37 36 43 43 36 36 39 37 37 47 47 48 59 59 48 42 39 39 39 43 43 48 48 48 28 28 14 21 21 28 28 48 48 57 57 54 54 54 54 54 47 57 47 47 48 59 47 43 43 47 57 57 57 54 47 44 32 24 12 12 24 32 32 57 37 37 37 35 21 24 18 19 24 27 24 18 18 20 32 24 39 35 32 32 32 32 39 39 43 43 43 44 48 48 42 31 31 18 18 31 34 32 28 20 20 18 21 17 29 26 27 22 19 19 26 29 39 39 41 29 29 32 37 37 37 46 46 28 30 22 26 18 25 18 20 26 22 19 18 21 12 10 7 6 7 6 8 12 22 23 32 34 30 28 20 16 10 11 16 18 15 19 19 20 18 19 24 22 20 23 23 30 28 39 31 34 25 24 16 13 12 12 15 16 24 21 12 12 10 15 13 19 16 22 18 21 11 10 13 27 23 32 35 17 19 11 9 9 9 9 9 9 9 9 9 9 12 9 9 9 9 10 10 10 12 11 10 10 13 25 23 34 18 17 12 16 10 10 10 10 10 11 11 9 10 11 14 17 16 15 12 10 10 10 13 19 25 11 10 8 9 8 8 8 10 13 10 10 8 8 9 8 8 8 10 10 8 8 8 8 11 8 10 12 14 14 16 13 11 10 8 8 8 8 11 12 12 10 10 9 10 8 8 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no306_e15.b1 MSMg01no306_e15.b1 CHROMAT_FILE:
MSMg01no306_e15.b1 PHD_FILE: MSMg01no306_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:01 2005
         (686 letters)



>mm_chr2_72564221_72565306
          Length = 1086

 Score = 1218 bits (630), Expect = 0.0
 Identities = 669/682 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctggcgcacatacctcctcatcctttcctgagtggacagggaagacgaatgccat 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctggcgcacatatctcctcatcctttcctgagtggacagggaagacgaatgccat 264

                                                                       
Query: 65  tcgagagtggcttccatgcacttctctgacataacccactgtctcctcttagtcatctgt 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 tcgagagtggcttccatgcacttctctgacataacccactgtctcctcttagtcatttgt 324

                                                                       
Query: 125 gaggcaaacttaaccctcaggagtgcagaaccgatgcacacagccagagggttagcaagc 184
           |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 gaggcaaaattaaccctcaggagtgcagaaccgatccacacagccagagggttagcaagc 384

                                                                       
Query: 185 ctgagcacttggtggtatgcccagacctgaggactgtgcacagttctgattgcttttctg 244
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgagcacctggtggtatgcccagacctgaggactgtgcacagttctgattgcttttctg 444

                                                                       
Query: 245 ttgttcacaagttgatttaacactccgtcaaagtgtccttttctcctgtgcccattttcc 304
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 ttgttcacaagttgatttaacactccgtcaaagtgttcttttctcctgtgcccattttcc 504

                                                                       
Query: 305 atgggagagaactgaggaagacagaggttaagagacgtggcctaagatttgaaccttggg 364
           |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 505 atgggagagaactgaggaagacagagcttaagagacgtggcctaagatttgaagcttggg 564

                                                                       
Query: 365 aacctcagctggtttcagagcctgagtgtgtcttgctgttgttgttgtaattttaatttc 424
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 aacctcagctggtttcagagcctgagtgtgtcttgttgttgttgttgtaattttaatttc 624

                                                                       
Query: 425 cttcaccaaaaaccatccggcatggaagtcaatttgaaaggagtcccactaacaaaaacg 484
           |||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 625 cttcaccaaaaagcatccggcatggaagtcaatttgaaaggactctcactaacaaaaacg 684

                                                                       
Query: 485 gaaaaagaaaaatctatcatcgaagaaattacatcacagccaggtatggtgtgtgcagct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaaaaagaaaaatctatcatcgaagaaattacatcacagccaggtatggtgtgtgcagct 744

                                                                       
Query: 545 cagacctgtaatcctaacactcaagaagctgaggcaggaggattgtcaagagtgcaaaac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 745 cagacctgtaatcctaacactcaagaagctgaggcaggaggattgtcaagagtacaaaac 804

                                                                       
Query: 605 cagcctgagttataaaacatggcaaattccaggcttctgcatcaaagccaatgatagtaa 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cagcctgagttataaaacatggcaaattccaggcttctgcatcaaagccaatgatagtaa 864

                                 
Query: 665 agtattataaatccctgaatgg 686
           ||||||||||||||||||||||
Sbjct: 865 agtattataaatccctgaatgg 886


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space:   727376
Effective search space used:   727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information