CTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCTGACTTGGCTCAAATAATTTAAGGAAGAAAGTCTTTAGAGAT
GGTCTTAGTTGATAGAAAGATGTAATAAAGTTAGAATCAAGAATAGAATG
TGAGGGGTTGGGGATTTAGCTCAGTGGTAGAGCACTTGCCTAGCAAGCGC
AAGGCCCTGGGTTTGGTCCTCAGCTCTGGAAAAAAAAAAAAAATAGAATG
TGGGCCAGGCAGTAGTGGTGCAGGCCTTTAATCCCAGCACTTGGGAGGCA
GAGGCAGGCAAATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGAGTGAGT
TCCAGGACAGCCAGGGCTACACCTGACTCAAACAAACAAACAAACAAACA
AACAAACAACCATGTGCCCACTCCTCAGAATCATACAATGAACTTTCATA
ATTAAACTAAAAAGAAAAATAGACTTGAGACAAATTTGTGTTCAAGAAAA
ACCATTTAGGTCGAAGGACAAAGTCATAGGTCTGTACTATGATAAGGCAA
GTCGGTGTAAAAACTTTCCCTTTGAACTTAGAATGAATATATTATAATGA
AACACTGCTTTGAACTTACTATCAACATCCTTCTGTAACTCCCATTTTAT
GTAATGTAGCAGTGAGTTTATCTACACCACTATGTGCTCCTGGCAGGTCA
TACACTTCCAGCCACCCGCCCAGGAA

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAATTTCTTGATATTGAAGTAGCTA
GAATCATTAAATAAATTAATTAATAGACAAAGTAATTGATAGTGAAGGTG
TAGGAGCCCAAGCGAAGCTCCATGTCTAACTGTGTAGACCTTCACTGAGG
TGGACAGAGCCGGGGCGAGGCCGGTGTCTGAGTGGCTGCCTTAAGCTAGC
TGTGCTATGCCTTATTTGTGAGTTGGTTAGAATAAAGTGATTGTATTTTT
AAAAAATGTTCAAAATGGGATCTTGAATATTTTCCATCTCATTAAGTGTA
AATTGGGCCTGGACGCTAACCCTGTGCTGATGGAACAGAATATTTGTATG
TCACAACCCTCTGGACCGACATGCTGCTAGGCTCAGCCTCTCCCAGGTTG
GCATGCCGTGCCTGTACTGGCACCCATGGATGCTGTCTTCAGCCAGAGCC
CCACAGCAATGCCAGGGAGCTGCTATTGAATCTTCTCAGGGGACAGTGAC
AGTCCTGATGATATGAATGAGACTCAGCGTTGCTGAGCTTCAGTCTTTCC
CGGGAAGATGGTGTGACAAGTTGTCAGCCTGTGTGAACCCGTGCGTCTAG
GGAGATGACTTAGCAGGTCAAGTGTTTGCTATGCAAGCACAGGTCCTGAG
CTGGGAGCCCCACCTAAAAGCAG

Query= MSMg01no307_l04.g1 MSMg01no307_l04.g1 CHROMAT_FILE:
MSMg01no307_l04.g1 PHD_FILE: MSMg01no307_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:49 2005
         (648 letters)



>mm_chr2_128709618_128710665
          Length = 1048

 Score = 1199 bits (620), Expect = 0.0
 Identities = 641/648 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatttcttgatattgaagtagctagaatcattaaataaattaattaatagacaaagtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatttcttgatattgaagtagctagaatcattaaataaattaattaatagacaaagtaa 260

                                                                       
Query: 61  ttgatagtgaaggtgtaggagcccaagcgaagctccatgtctaactgtgtagaccttcac 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ttgatagtgaaggtgtaggagcccaagcgaaactccatgtctaactgtgtagaccttcac 320

                                                                       
Query: 121 tgaggtggacagagccggggcgaggccggtgtctgagtggctgccttaagctagctgtgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggtggacagagccggggcgaggccggtgtctgagtggctgccttaagctagctgtgc 380

                                                                       
Query: 181 tatgccttatttgtgagttggttagaataaagtgattgtatttttaaaaaatgttcaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgccttatttgtgagttggttagaataaagtgattgtatttttaaaaaatgttcaaaa 440

                                                                       
Query: 241 tgggatcttgaatattttccatctcattaagtgtaaattgggcctggacgctaaccctgt 300
           |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tgggatcttggatattttccatctcattaagtgtaaattgggcctggatgctaaccctgt 500

                                                                       
Query: 301 gctgatggaacagaatatttgtatgtcacaaccctctggaccgacatgctgctaggctca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgatggaacagaatatttgtatgtcacaaccctctggaccgacatgctgctaggctca 560

                                                                       
Query: 361 gcctctcccaggttggcatgccgtgcctgtactggcacccatggatgctgtcttcagcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 561 gcctctcccaggttggcatgccgtgcctgtactggcacccatggatgttgtgttcagcca 620

                                                                       
Query: 421 gagccccacagcaatgccagggagctgctattgaatcttctcaggggacagtgacagtcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagccccacagcaatgccagggagctgctattgaatcttctcaggggacagtgacagtcc 680

                                                                       
Query: 481 tgatgatatgaatgagactcagcgttgctgagcttcagtctttcccgggaagatggtgtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgatgatatgaatgagactcagcgttgctgagcttcagtctttcccgggaagatggtgtg 740

                                                                       
Query: 541 acaagttgtcagcctgtgtgaacccgtgcgtctagggagatgacttagcaggtcaagtgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acaagttgtcagcctgtgtgaacccgtgcgtctagggagatgacttagcaggtcaagtgt 800

                                                           
Query: 601 ttgctatgcaagcacaggtcctgagctgggagccccacctaaaagcag 648
           |||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 801 ttgctatgcaagcataggtcctgagctcggagccccacctaaaagcag 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)