Query= MSMg01no307_m01.b1 MSMg01no307_m01.b1 CHROMAT_FILE:
MSMg01no307_m01.b1 PHD_FILE: MSMg01no307_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:53 2005
(353 letters)
>mm_chr2_180139172_180139924
Length = 753
Score = 553 bits (286), Expect = e-162
Identities = 315/328 (96%), Gaps = 7/328 (2%)
Strand = Plus / Minus
Query: 22 cagagttcggcaatttccacagtagtttaagtttctttgcctcggaagatccgattaaac 81
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaattcggcaatttccacagtagtttaagtttctttgcctcggaagatccgattaaac 262
Query: 82 cgtgcatttgtgtgtaggcttattccgtctgttttattttgtttttaatttagttttgtt 141
|||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 261 agtgcatttgtgtgtaggcttatcccgtctg-----ttttgtttttaatttagttttgtt 207
Query: 142 tttgagacagggtcttgtgtagcccaggctagcctctagctcactaagtagactgtgtct 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tttgagacagggtcttgtgtagcccaggctagcctctagctcactaagtagactgtgtct 147
Query: 202 caagtcaataaaacaaagagaaaaagaggaagccttctagctgggtgtggtagtatacac 261
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 146 caagtcaataaaacaaagagaaaaagaggaagccttctagctgggtgtggtagtgtacac 87
Query: 262 cttaaacccaagggaagcttagcaggtgactctctgaatttcaggccagcctggtctact 321
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 86 cttaaacccaagggaagcagagcaggtgactct--gaatttcaggccagcctggtctact 29
Query: 322 acagagaagccctgtcttgagaaaacaa 349
||||||||||||||||||||||||||||
Sbjct: 28 acagagaagccctgtcttgagaaaacaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_m01.g1 MSMg01no307_m01.g1 CHROMAT_FILE:
MSMg01no307_m01.g1 PHD_FILE: MSMg01no307_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:53 2005
(335 letters)
>mm_chr2_179959095_179959829
Length = 735
Score = 572 bits (296), Expect = e-168
Identities = 326/340 (95%), Gaps = 8/340 (2%)
Strand = Plus / Plus
Query: 1 cttcaccgctcccctttctccaccccgacgaatccgttttt-cagctattctttccctcg 59
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 193 cttcaccgctcccctttctccaccccgacgaatccgttttttcagctattctttccctcg 252
Query: 60 ccagcctccttccaggaacgtggaagcaggtccctagagaaagtagctaaagttaccagg 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 253 ccagcctccttccaggaacgtggaagcaggtccctagagaaggtagctaaagttaccagg 312
Query: 120 ccctaatggctcccaactccttaggtccctaacgtgaggcaggagtcctgcggggggggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccctaatggctcccaactccttaggtccctaacgtgaggcaggagtcctgcggggggggg 372
Query: 180 -------acaacgtggcccacctgcaggctcagcctgaaaggcagggctcaggagagtcc 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gggggggacaacgtggcccacctgcaggctcagcctgaaaggcagggctcaggagagtcc 432
Query: 233 ttaggtactgaatccacatctcccgggagactgaagcccgagaacctaccacctgctggg 292
|||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 433 ttaggtacagaatccacatctcccgggagactaaagccccagagcctaccacctgctggg 492
Query: 293 tagggggctcctccacgatggcccacaggtgttagcgctc 332
|||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cagggggctcctccacgatggcccacaggtgttagcgctc 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
