Query= MSMg01no309_b11.b1 MSMg01no309_b11.b1 CHROMAT_FILE:
MSMg01no309_b11.b1 PHD_FILE: MSMg01no309_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:35 2005
(270 letters)
>mm_chr2_130628839_130629511
Length = 673
Score = 412 bits (213), Expect = e-119
Identities = 256/271 (94%), Gaps = 5/271 (1%)
Strand = Plus / Minus
Query: 4 ggaattcatcagagagctgctttcccggataagaggcatgaggaagctgagccctccgca 63
||||||||||||||||||||| ||||| |||||| ||||||||||||||| |||||||||
Sbjct: 473 ggaattcatcagagagctgctctcccgaataaga-gcatgaggaagctgaaccctccgca 415
Query: 64 gaagaagagcgtatgatttcactacagggtaaaattctctcggcgatgaagaaagcaacc 123
||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||
Sbjct: 414 gaagaagagcgtatgattttgctacagggtaaaattctctcagagatgaagaaagcaacc 355
Query: 124 tgggatttggaccccacagatacttttcttaaaaaa-aaa-aaataaccatagttgtctt 181
||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 354 tggaatttggaccccacagatacttttcttaaaaaataaataaataaccatagttgtctt 295
Query: 182 ttacaacaacatttttttggtgtgtatgtgtgtgtgctgggggg--tagacatttattca 239
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 294 ttacaacaacatttttttggtgtgtatgtgtgtgtgttggggggagtagacatttattca 235
Query: 240 aaagtgtttcttcttttgctgtttttaaagg 270
|||||||||||||||||| ||||||||||||
Sbjct: 234 aaagtgtttcttcttttgttgtttttaaagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 673
Length adjustment: 9
Effective length of query: 261
Effective length of database: 664
Effective search space: 173304
Effective search space used: 173304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no309_b11.g1 MSMg01no309_b11.g1 CHROMAT_FILE:
MSMg01no309_b11.g1 PHD_FILE: MSMg01no309_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:35 2005
(288 letters)
>mm_chr10_6696679_6697367
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 tttctgcctctaggatgttccacctcctatttcctgcctaagccataggctgtaggcttt 60
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tttctgcctttaggatgttccacctcctatttcctgcctgagccataggctgtaggcttt 260
Query: 61 ttgattgataggtggctcatccatacaatggacaaggtattctctacaaataacttttt- 119
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 ttgattgataggtggctcatccatacaatgggcaaggtattctctacaaataactttttt 320
Query: 120 atatcagagagtcagggaggtgatgagaagtctgcagggcttagagggttgctttgtgtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatcagagagtcagggaggtgatgagaagtctgcagggcttagagggttgctttgtgtg 380
Query: 180 tctaagaagaggtgactcttcattcttccctctgcctctgtagagtgaaaggccaggatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaagaagaggtgactcttcattcttccctctgcctctgtagagtgaaaggccaggatt 440
Query: 240 ctagccttcatttcacagtgggaaaccagacctggcgcggggagggggg 288
|||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 ctagccttcatttcacagtgggaaaccagacctggcgcgggg-gggggg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
