TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTCCTCTCAGTTTATTCTACCCGGGTCCTCATTGTATTGAATTAT
GCAGATCATAATATTCAGGTCAAGTCTTCTCTTCTTACTTAATTCTCTAT
GGAAACTCCCCTACAGGCACAACTTAAACTGTGTATTTGTAATATAGGTG
TATTTCAATGTAAAAAGATCTAGAAATATGTATTAGTTATGTAGGTGTTC
TTCAATCCATTCAAACTGACATTGGATATTGGTCCTCACAGTCCACTTCT
TGATTCGCTTTCCAATTATTACCTTGTAGCATTATATTAAGGTGATAATT
CAGCATATGTGAAACCAAAAGTTTAATTTGCTTTTAAAGTGTTATGATTT
TAAAAGTTCAGTGCCAAAATCTGTTCTGAGCCTCAAAGAAATCTCTTAGT
TGTGAGTCCTGTAAAATTAAAGAGGAGGAGAAGGAGGAGGAGGAGGAGAA
GGAAGAGAAGGNGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNG
GNNNGGNNNNNNGNNNNNNGNNNNNNNGNGNGNNNNNNNNGGNGNGNGGG
NNNGNGGNNGGNNGGNGNNGGGGGGGGGGGGGGNGNNGGGGGGGGNNGGG
NGNNNNNNGGGGNNNNNNGGGNNNGGGGGGGNGGGGNGGGGGGGNNNGGG
GNNNNGGGGGGG

CGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATAAAATATTTAATTCCATTCTT
TATTTCTTCCCTGACTGATTTGTCACTGAGTAGAGAGTTGTTCAGTTTCC
ATGTGTATGTGTGATTTCTGTTGTTTTTGTTGTTATTGAAGTCTAGCCTT
AGTCGTTTGTGATTTGACATTATGAATAGTATCATCTCAATCTTTTTTTA
ATCTGTTGAGGCTCATTTTGTGGCCAATTATATGATCAGTTTTGGATAAA
GTGCCACGAAGTCCTGAGAATAAGATATATTCTTTTGTTTTAGGGTGAAA
TGTTCTATATATATCTGTTAAATCCACTTGCTTTGTGACTTCTGTAAGTT
TCACTGTGACTCTGTTTAGCTTGTTTCAATGACCTGTCCATTAATTAGAA
TGAGGTGTTGAAGTCTGTCACTATTATTCTGTGAGATTCAATATGTGTTT
TGAGCTTTAGAAATCTTTCTTTTGTAAATGTAGGTAATTCTGCATTGCAT
TTGGGGCATGGATGTTCAGAAATGAGACTTTATCCTGATGGATGTTCCCT
TTGATGAATATGATATGTCCTTCCTTATCTTTTCTGATAACTTTTGTTTG
AAAGTCTATTTTAATGAATATTANAATTGAAACCCCTACTTGTTTCTTGG
GAC

Query= MSMg01no311_e18.b1 MSMg01no311_e18.b1 CHROMAT_FILE:
MSMg01no311_e18.b1 PHD_FILE: MSMg01no311_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:06 2005
         (467 letters)



>mm_chr2_55733271_55734137
          Length = 867

 Score =  868 bits (449), Expect = 0.0
 Identities = 455/457 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctcctctcagtttattctacccgggtcctcattgtattgaattatgcagatca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gaattctctcctctcagtttattctacccgggtcctcattgtattgaattatgcagatca 492

                                                                       
Query: 65  taatattcaggtcaagtcttctcttcttacttaattctctatggaaactcccctacaggc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 taatattcaggtcaagtcttctcttcttacttaattctctatggaaactcccctacaggc 432

                                                                       
Query: 125 acaacttaaactgtgtatttgtaatataggtgtatttcaatgtaaaaagatctagaaata 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acaacttaaactgtgtatttgtaatataggtgtatttcaatgtaaaaagatctagaaata 372

                                                                       
Query: 185 tgtattagttatgtaggtgttcttcaatccattcaaactgacattggatattggtcctca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgtattagttatgtaggtgttcttcaatccattcaaactgacattggatattggtcctca 312

                                                                       
Query: 245 cagtccacttcttgattcgctttccaattattaccttgtagcattatattaaggtgataa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cagtccacttcttgattcgctttccaattattaccttgtagcattatattaaggtgataa 252

                                                                       
Query: 305 ttcagcatatgtgaaaccaaaagtttaatttgcttttaaagtgttatgattttaaaagtt 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 251 ttcagcatatgtgaaaccaaaagtttaatttgcttttaaagtgttatcattttaaaagtt 192

                                                                       
Query: 365 cagtgccaaaatctgttctgagcctcaaagaaatctcttagttgtgagtcctgtaaaatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cagtgccaaaatctgttctgagcctcaaagaaatctcttagttgtgagtcctgtaaaatt 132

                                                
Query: 425 aaagaggaggagaaggaggaggaggaggagaaggaag 461
           ||||||||||| |||||||||||||||||||||||||
Sbjct: 131 aaagaggaggacaaggaggaggaggaggagaaggaag 95


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space:   391649
Effective search space used:   391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)