Query= MSMg01no315_c11.b1 MSMg01no315_c11.b1 CHROMAT_FILE:
MSMg01no315_c11.b1 PHD_FILE: MSMg01no315_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:32 2005
(367 letters)
>mm_chr2_73973111_73973876
Length = 766
Score = 679 bits (351), Expect = 0.0
Identities = 360/363 (99%), Gaps = 1/363 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgggttcctccacatatgtagccacactggcaccagcacttggtagtagctaa 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgggttcctatacatatgtagccacactggcaccagcacttggtagtagctaa 264
Query: 65 aagctcaggccttgaatttgaatcttatttcctaattaattctgagatgttggggattca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagctcaggccttgaatttgaatcttatttcctaattaattctgagatgttggggattca 324
Query: 125 gtgtattgctttcagccttcatttcctccactgtccctcccaaggtcacagagagaattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgtattgctttcagccttcatttcctccactgtccctcccaaggtcacagagagaattt 384
Query: 185 atcaaaatgatggttactaaagtgcctatcagagggcctggtaaccagcaagcagtaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcaaaatgatggttactaaagtgcctatcagagggcctggtaaccagcaagcagtaaat 444
Query: 245 taatgctggttgttatcccagagtgcttcgagtttacccagctccatcttgagcctcagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taatgctggttgttatcccagagtgcttcgagtttacccagctccatcttgagcctcagc 504
Query: 305 catgtttgcatgctaaaaagaggtacttggaagagtatctgaacaaactgtcttttttaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 catgtttgcatgctaaaaagaggtacttggaagagtatctgaacaaactgtcttttt-aa 563
Query: 365 aag 367
|||
Sbjct: 564 aag 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_c11.g1 MSMg01no315_c11.g1 CHROMAT_FILE:
MSMg01no315_c11.g1 PHD_FILE: MSMg01no315_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:32 2005
(631 letters)
>mm_chr2_74133682_74134712
Length = 1031
Score = 932 bits (482), Expect = 0.0
Identities = 522/542 (96%), Gaps = 13/542 (2%)
Strand = Plus / Minus
Query: 1 attacatgagagtatttgtcacttctctaggggttgaggcttgttctgggcaagcactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 attacatgagagtatttgtcacttctctaggggttgaggcttgttctgggcaagcactgg 477
Query: 61 agatgtcaaaaaacactggtctctccagcagaggctgccagcaagtcaagggcagtttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agatgtcaaaaaacactggtctctccagcagaggctgccagcaagtcaagggcagtttaa 417
Query: 121 ccactaatggcatagaaaggatgcccaggacactccacctttgctccaggaaggagctac 180
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 416 tcactaatggcatagaaaggatgcccaggacactccacctctgctccaggaaggagctac 357
Query: 181 tggttctccaagagcagtagctttcttcacctccttttgagctacagaactttggatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tggttctccaagagcagtagctttcttcacctccttttgagctacagaactttggatact 297
Query: 241 ctcaggtacttgagaatttatattaaaaattacacttaattttagagggttcgtaatctc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 296 ctcaggtacttgagaatttatattaaaaattacacttaattttagagggttcataatctc 237
Query: 301 cccagtcccacaaatggacctccaatgtaagcttct------gcgccccccaaacaaggt 354
|||||||||||||||||||||||||||||||||||| | | ||| ||||
Sbjct: 236 cccagtcccacaaatggacctccaatgtaagcttctatgttaggg------aaataaggc 183
Query: 355 caatgttctttaaacagataatgagcattctgcagattatctgtttggtgttgaggctag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caatgttctttaaacagataatgagcattctgcagattatctgtttggtgttgaggctag 123
Query: 415 agtctagctaaggtactttggaaaaggcttcatggagcaaatgaaccttgatcttgacta 474
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 actctagctaaggtactttggaaaaggcttcatggagcaaatgaaccttgatcttgacta 63
Query: 475 taaagtcttttgaacactttgg-ggtcaaagggagagtgtttcaagcagaatgaatgagc 533
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 62 taaagtcttttgaacactttggaggtcaaagggagagtgtttcaagcagaatgaatgagc 3
Query: 534 aa 535
||
Sbjct: 2 aa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
