Query= MSMg01no316_a23.b1 MSMg01no316_a23.b1 CHROMAT_FILE:
MSMg01no316_a23.b1 PHD_FILE: MSMg01no316_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:43 2005
(716 letters)
>mm_chr2_43819131_43820246
Length = 1116
Score = 911 bits (471), Expect = 0.0
Identities = 516/557 (92%), Gaps = 40/557 (7%)
Strand = Plus / Minus
Query: 3 gaattcctaagaagtttgcctatgccatgtgttcatagggtaatagcaccacaaagagtc 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaattcctaagaagtttgtctatgccatgtgttcatagggtaatagcaccacaaagagtc 498
Query: 63 tgtgatgatgtttcaaactgcatcagcatcactggggaaagtattcattaaagcttttca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgtgatgatgtttcaaactgcatcagcatcactggggaaagtattcattaaagcttttca 438
Query: 123 gaaaagtcaaattagaggtggggaaaatttctcctaaggagcaaccattaatcacattgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaaaagtcaaattagaggtggggaaaatttctcctaaggagcaaccattaatcacattgg 378
Query: 183 gtttcttcctccccttgctttcccattattcacaaaggattgccaaagatgttgtatttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtttcttcctccccttgctttcccattattcacaaaggattgccaaagatgttgtatttt 318
Query: 243 tattttttaaactgctcccttatttaattatacagaatatatttgttcaggttgccagta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tattttttaaactgctcccttatttaattatacagaatatatttgttcaggttgccagta 258
Query: 303 caggccgtgagtattcatccctggatgatgttaactgcatctgcagcctcaatagtctct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 caggccgtgagtattcatccctggatgatgttaactgcatctgcagcctcaatagtctct 198
Query: 363 ctctctctctctctctctct---------------------------------------- 382
||||||||||||||||||||
Sbjct: 197 ctctctctctctctctctctctctctctctctctctctctctctctctctttctctctct 138
Query: 383 ttctctctctctctctccactttaagtgtctgttctgagctttaaggagtaaatgatagt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ttctctctctctctctccactttaagtgtctgttctgagctttaaggagtaaatgatagt 78
Query: 443 gaagataactggaaacactccaaggtttttatatgcactttgtagttgaaacaaaaatta 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gaagataactggaaacactccaaggtttttatatgcactttgtagttgaaacaaaaatta 18
Query: 503 gtagttagattccagaa 519
|||||||||||||||||
Sbjct: 17 gtagttagattccagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 716
Length of database: 1116
Length adjustment: 10
Effective length of query: 706
Effective length of database: 1106
Effective search space: 780836
Effective search space used: 780836
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no316_a23.g1 MSMg01no316_a23.g1 CHROMAT_FILE:
MSMg01no316_a23.g1 PHD_FILE: MSMg01no316_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:43 2005
(210 letters)
>mm_chr2_43626902_43627511
Length = 610
Score = 406 bits (210), Expect = e-118
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 1 ctctgagagtgcttgtgatatctggttctgaaatagctgtcctcagaaagctccctgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctgagagtgcttgtgatatctggttctgaaatagctgtcctcagaaagctccctgtgg 260
Query: 61 tagccagtgtcatatgaaaaggttcatatttgtgtatatgtgtgtatgtacatatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagccagtgtcatatgaaaaggttcatatttgtgtatatgtgtgtatgtacatatataaa 320
Query: 121 ctgcccgaagcaatcttgttctcaagggagatgttcatttttcacagtaagatggaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgcccgaagcaatcttgttctcaagggagatgttcatttttcacagtaagatggaaaca 380
Query: 181 taagggttattctgaaatggaatggaaata 210
||||||||||||||||||||||||||||||
Sbjct: 381 taagggttattctgaaatggaatggaaata 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
