Query= MSMg01no317_e15.b1 MSMg01no317_e15.b1 CHROMAT_FILE:
MSMg01no317_e15.b1 PHD_FILE: MSMg01no317_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:17 2005
(612 letters)
>mm_chr2_53096253_53097264
Length = 1012
Score = 1015 bits (525), Expect = 0.0
Identities = 540/545 (99%)
Strand = Plus / Minus
Query: 5 gaattctttatatatttcgtatatcagtcctctgtcagttgtggggtgggtaaagacttt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaattctttatatattttgtatatcagtcctctgtcagttgtggggtgggtaaagacttt 486
Query: 65 tcacattctgttggccgccattttgttcttttgatggtgtctcttaaggcctggttaact 124
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcccattctgttggttgccattttgttcttttgatggtgtctcttaaggcctggttaact 426
Query: 125 actgcctctctaactagacatttaggactgttattactgttaccaggaaactttctcatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 actgcctctctaactagacatttaggactgttattactgttaccaggaaactttctcatg 366
Query: 185 cctgaattgattgcatattctgttatgttctgtgctttggtgttcttggaaaccaatcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cctgaattgattgcatattctgttatgttctgtgctttggtgttcttggaaaccaatcac 306
Query: 245 aatagaagtcagactgagttgtaaccacaataaacttagaccagatccaaccacctagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatagaagtcagactgagttgtaaccacaataaacttagaccagatccaaccacctagca 246
Query: 305 acatttcctacacctgtgtatgagcttttatggtctttgcctttataagctgcccctggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acatttcctacacctgtgtatgagcttttatggtctttgcctttataagctgcccctggg 186
Query: 365 aaggatcccaacacaagaaagacacctgcaccaatataagaagccatttgaaataagact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaggatcccaacacaagaaagacacctgcaccaatataagaagccatttgaaataagact 126
Query: 425 tccattttgagctaggggttttaagttcccaaggccaccctgggaattgacattctactc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tccattttgagctaggggttttaagttcccaaggccaccctgggaattgacattctactc 66
Query: 485 tgcagaaagagtcatgcacatgggtaactgacatcctggttggcaagttaagaagagaat 544
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 65 tgcagaaagagtcatgcacatgggtaacggacatcctggttggcaagttaagaagagaat 6
Query: 545 gttag 549
|||||
Sbjct: 5 gttag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_e15.g1 MSMg01no317_e15.g1 CHROMAT_FILE:
MSMg01no317_e15.g1 PHD_FILE: MSMg01no317_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:17 2005
(341 letters)
>mm_chr2_53008475_53009210
Length = 736
Score = 611 bits (316), Expect = e-179
Identities = 332/340 (97%), Gaps = 5/340 (1%)
Strand = Plus / Plus
Query: 1 agtttcatagaacaaaggtaaattagtgtttaaacggctgtgattgcaatagatagcaac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 agtttcatagaacaaaggtaaattagtgtttaaacggctgtgattgcaatagatagtaac 260
Query: 61 cacttgacatggtagcaataactgttttttaaaaagtcttttacatgaatctaacacaag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttgacatggta-----aactgttttttaaaaagtcttttacatgaatctaacacaag 315
Query: 121 tgaaattttaagaactaccaccctaaatgataacaatagatcaaacagactattaatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgaaattttaagaactaccaccctaaatgataacaatagatcaaacagactattaatgcc 375
Query: 181 aggtaacaagcttatataagccattgcaaccttgctggtaccctaatacagagtttaata 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 376 aggtaacaagcttatataagccactgcaaccttgctggtaccctaatacagagtttaata 435
Query: 241 taagactaaagactgtttgtaaccaagactgtatagttttaaattctagctctatactta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 taagactaaagactgtttgtaaccaagactgtatagttttaaattctagctctatactta 495
Query: 301 gtagtatctcaccaagtccgtttccttatttacctgaata 340
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 496 gtagtatctcaccaagtccgtttctttatttacctgaata 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 736
Length adjustment: 9
Effective length of query: 332
Effective length of database: 727
Effective search space: 241364
Effective search space used: 241364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
