Query= MSMg01no318_f10.b1 MSMg01no318_f10.b1 CHROMAT_FILE:
MSMg01no318_f10.b1 PHD_FILE: MSMg01no318_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:30 2005
(371 letters)
>mm_chr2_113293908_113294676
Length = 769
Score = 687 bits (355), Expect = 0.0
Identities = 362/365 (99%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 4 gaattcacttctacttctcttgaatactggtgtactgaaggagccctaatgctactgggg 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaattcacttctacttatcttgaatactggtgtactgaaggagccctaatgctactgggg 507
Query: 64 gaaaaaaaaaaaagaacacagaatgcagatctgaaaaatcattcatttgtttctgttttt 123
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 g--aaaaaaaaaagaacacagaatgcagatctgaaaaatcattcatttgtttctgttttt 449
Query: 124 aacaaatttagtgctcttacatggaccttgtattctctgttacttaatatacagaaaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aacaaatttagtgctcttacatggaccttgtattctctgttacttaatatacagaaaaat 389
Query: 184 gtccgaatactttcctttatcttgaagtcacaaggatatttttggtgaagacttcattat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtccgaatactttcctttatcttgaagtcacaaggatatttttggtgaagacttcattat 329
Query: 244 tgaagatgccagagtttcggggaagaggaatatacaatgcacacgattaatgcgtttata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tgaagatgccagagtttcggggaagaggaatatacaatgcacacgattaatgcgtttata 269
Query: 304 atatatgttataaatgtcataactaaactcttattgaagataataaatatatgctaattg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atatatgttataaatgtcataactaaactcttattgaagataataaatatatgctaattg 209
Query: 364 tattg 368
|||||
Sbjct: 208 tattg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 769
Length adjustment: 9
Effective length of query: 362
Effective length of database: 760
Effective search space: 275120
Effective search space used: 275120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_f10.g1 MSMg01no318_f10.g1 CHROMAT_FILE:
MSMg01no318_f10.g1 PHD_FILE: MSMg01no318_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:30 2005
(336 letters)
>mm_chr2_113118609_113119344
Length = 736
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Plus
Query: 1 cagagttccctgatgcaacattgcaaatgcacaactccgtaaagacggggctgtgtatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagttccctgatgcaacattgcaaatgcacaactccgtaaagacggggctgtgtatgt 260
Query: 61 tcaagggatttaaaattaggctcatctaaagatgaaaatgttttaaggtctgtgtcgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaagggatttaaaattaggctcatctaaagatgaaaatgttttaaggtctgtgtcgtat 320
Query: 121 gtttatagatgacaccatgctatctatttgtttacagggtataaagaaaactgtataaaa 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gtttatagatgacaccatgctatctatttgtttacaggatataaagaaaactgtataaaa 380
Query: 181 cagacaagtgagaactctatgaacatttatagaatcttcatagaatatttactgtagagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagacaagtgagaactctatgaacatttatagaatcttcatagaatatttactgtagagc 440
Query: 241 taatccagagaaaattaactcaaagttcttccaaaaaggtttgatcactgtttttgaagt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatccagagaaaaataactcaaagttcttccaaaaaggtttgatcactgtttttgaagt 500
Query: 301 gtgagtgaatatatgcacctcagaaagatccaggta 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgagtgaatatatgcacctcagaaagatccaggta 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
